RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1120586", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1120586 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2303755 2303755 PRJNA1120586_P_NODE_38422_length_238_cov_1.360947_g38231_i0 PRJNA1120586 38422 238 1.360947 3.23905386 Metazoa 33208 Cnidaria other_Eukaryota 122 1.61e-23   NTclustered gi|605060084|gb|KF874224.1| 109801 g38231 i0 86.207 50.2605042016807 116 12 48 4 1 115 345 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 11962 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
27291408 27291408 PRJNA1120586_P_NODE_24383_length_279_cov_4.409524_g24192_i0 PRJNA1120586 24383 279 4.409524 12.30257196 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 43.1 0.0381   NR KAJ7377087.1 174260 g24192 i0 28 1 93 59 94.6 2 8 271 177 266 KAJ7377087.1 hypothetical protein OS493_030681 [Desmophyllum pertusum] diamond 279 43.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum
32082425 32082425 PRJNA1120586_P_NODE_51378_length_227_cov_0.911392_g51187_i0 PRJNA1120586 51378 227 0.911392 2.06885984 Porites 46719 Cnidaria other_Eukaryota 69.3 1.29e-11   NR CAH3170732.1 104178 g51187 i0 50.8 2.49779735682819 63 31 83.3 0 2 190 75 137 CAH3170732.1 unnamed protein product [Porites evermanni] diamond 567 69.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites evermanni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;