RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1120203", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Thermoproteota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120203 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3578670 3578670 PRJNA1120203_P_NODE_75983_length_255_cov_1.494505_g74967_i0 PRJNA1120203 75983 255 1.494505 3.81098775 Archaea 2157 Archaea Archaea 466 6.98e-127   NTclustered gi|7657951|dbj|AB017920.1| 59822 g74967 i0 99.608 100.035294117647 255 1 100 0 1 255 22 276 Desulfurococcus sp. SY 16S rRNA, partial sequence blastn 25509 466 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Desulfurococcus Desulfurococcus sp. SY
4855609 4855609 PRJNA1120203_P_NODE_26624_length_468_cov_19.572152_g25610_i0 PRJNA1120203 26624 468 19.572152 91.59767136 Archaea 2157 Archaea Archaea 520 1.04e-142   NTclustered gi|83319219|dbj|AB243795.1| 29281 g25610 i0 98.635 94.5448717948718 293 4 95 0 164 456 369 661 Uncultured crenarchaeote gene for 16S rRNA, partial seqence, clone:NRP-D blastn 44247 520 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
6130772 6130772 PRJNA1120203_P_NODE_54305_length_306_cov_23.343348_g53289_i0 PRJNA1120203 54305 306 23.343348 71.43064488 root 1 Root_unresolved Root_unresolved 281 3.34e-71   NTclustered gi|42406171|gb|AY522862.1| 29281 g53289 i0 99.355 89.0392156862745 155 1 95 0 150 304 497 343 Uncultured crenarchaeote clone MWS31 16S ribosomal RNA gene, partial sequence blastn 27246 281 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
26975114 26975114 PRJNA1120203_P_NODE_68742_length_271_cov_1.176768_g67726_i0 PRJNA1120203 68742 271 1.176768 3.18904128 Crenarchaeota archaeon 13_1_4 2056631 Archaea Archaea 133 6.3e-34   NR OLD11911.1 1805095 g67726 i0 71.9 0.985239852398524 89 25 98.5 0 4 270 680 768 OLD11911.1 MAG: hypothetical protein AUI93_03580 [Crenarchaeota archaeon 13_1_40CM_3_52_10] diamond 267 133 1 Archaea   Thermoproteati Thermoproteota         Crenarchaeota archaeon 13_1_40CM_3_52_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;