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contig_metadata

13 rows where bioproject = "PRJNA1120203" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA1120203 · 13 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9203408 9203408 PRJNA1120203_P_NODE_86048_length_248_cov_0.880000_g85032_i0 PRJNA1120203 86048 248 0.88 2.1824 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 150 9.599999999999999e-41   NR TMQ26727.1 2053607 g85032 i0 90.2 3.96774193548387 82 8 99.2 0 1 246 311 392 TMQ26727.1 MAG: glutamine--tRNA ligase/YqeY domain fusion protein [Candidatus Rokuibacteriota bacterium] diamond 984 150 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
20676820 20676820 PRJNA1120203_P_NODE_82617_length_250_cov_0.870056_g81601_i0 PRJNA1120203 82617 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 174 1.3e-48   NR OLD40112.1 1805354 g81601 i0 96.4 4.98 83 3 99.6 0 250 2 642 724 OLD40112.1 MAG: hypothetical protein AUI57_00900, partial [Candidatus Rokubacteria bacterium 13_1_40CM_2_68_8] diamond 1245 174 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium 13_1_40CM_2_68_8
27733794 27733794 PRJNA1120203_P_NODE_76404_length_254_cov_1.690608_g75388_i0 PRJNA1120203 76404 254 1.6906080000000001 4.29414432 Candidatus Rokubacteria bacterium 13_1_4 1805367 Bacteria Bacteria 50.8 2.93e-6   NR OLC15503.1 1805367 g75388 i0 70.6 0.401574803149606 34 10 40.2 0 148 249 2 35 OLC15503.1 MAG: hypothetical protein AUH29_07765 [Candidatus Rokubacteria bacterium 13_1_40CM_69_27] diamond 102 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium 13_1_40CM_69_27
27891198 27891198 PRJNA1120203_P_NODE_64165_length_281_cov_1.384615_g63149_i0 PRJNA1120203 64165 281 1.384615 3.89076815 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 86.7 2.11e-17   NR PYN80010.1 2053607 g63149 i0 63.2 0.811387900355872 76 27 81.1 1 49 276 29 103 PYN80010.1 MAG: hypothetical protein DMD96_15120 [Candidatus Rokuibacteriota bacterium] diamond 228 86.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28017780 28017780 PRJNA1120203_P_NODE_94365_length_245_cov_0.895349_g93349_i0 PRJNA1120203 94365 245 0.895349 2.19360505 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 88.2 3.12e-18   NR MDO8475744.1 2053607 g93349 i0 97.7 0.52653061224489806 43 1 52.7 0 245 117 76 118 MDO8475744.1 amidohydrolase family protein [Candidatus Rokuibacteriota bacterium] diamond 129 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28070056 28070056 PRJNA1120203_P_NODE_96125_length_244_cov_0.918129_g95109_i0 PRJNA1120203 96125 244 0.918129 2.24023476 Pseudomonadati 3379134 Bacteria Bacteria 74.7 1.66e-13   NR RPH76518.1 2053607 g95109 i0 94.4 1.77049180327869 36 2 44.3 0 109 2 1 36 RPH76518.1 MAG: aromatic ring-hydroxylating dioxygenase subunit alpha, partial [Candidatus Rokuibacteriota bacterium] diamond 432 74.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28649224 28649224 PRJNA1120203_P_NODE_66387_length_276_cov_1.374384_g65371_i0 PRJNA1120203 66387 276 1.374384 3.79329984 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 143 2.27e-38   NR PYN41680.1 2053607 g65371 i0 89.1 3 92 10 100 0 1 276 316 407 PYN41680.1 MAG: hypothetical protein DME00_31065 [Candidatus Rokuibacteriota bacterium] diamond 828 143 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28890820 28890820 PRJNA1120203_P_NODE_100348_length_243_cov_0.905882_g99332_i0 PRJNA1120203 100348 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 94.7 6.7e-23   NR MDO8477176.1 2053607 g99332 i0 53.8 12.716049382716 80 37 98.8 0 242 3 38 117 MDO8477176.1 HNH endonuclease [Candidatus Rokuibacteriota bacterium] diamond 3090 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
29469708 29469708 PRJNA1120203_P_NODE_76470_length_254_cov_1.524862_g75454_i0 PRJNA1120203 76470 254 1.524862 3.87314948 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 108 2.96e-25   NR MET0487843.1 2053607 g75454 i0 68.4 0.933070866141732 79 25 93.3 0 237 1 201 279 MET0487843.1 N,N-dimethylformamidase beta subunit family domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 237 108 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30701946 30701946 PRJNA1120203_P_NODE_97454_length_244_cov_0.900585_g96438_i0 PRJNA1120203 97454 244 0.900585 2.1974274 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 116 1.68e-28   NR MBM3217458.1 2053607 g96438 i0 79.7 0.971311475409836 79 16 97.1 0 6 242 182 260 MBM3217458.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB [Candidatus Rokuibacteriota bacterium] diamond 237 116 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31681721 31681721 PRJNA1120203_P_NODE_63317_length_283_cov_1.119048_g62301_i0 PRJNA1120203 63317 283 1.119048 3.16690584 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 116 2.81e-29   NR MBI2153665.1 2053607 g62301 i0 96.6 0.625441696113074 59 2 62.5 0 1 177 19 77 MBI2153665.1 YncE family protein [Candidatus Rokuibacteriota bacterium] diamond 177 116 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32188205 32188205 PRJNA1120203_P_NODE_65678_length_278_cov_0.985366_g64662_i0 PRJNA1120203 65678 278 0.985366 2.73931748 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 122 9.5e-34   NR PYM90328.1 2053607 g64662 i0 93.1 1.55395683453237 72 5 77.7 0 216 1 1 72 PYM90328.1 MAG: anti-anti-sigma factor [Candidatus Rokuibacteriota bacterium] diamond 432 122 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
32725316 32725316 PRJNA1120203_P_NODE_91440_length_246_cov_0.890173_g90424_i0 PRJNA1120203 91440 246 0.890173 2.18982558 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 172 1.41e-52   NR PYO58535.1 2053607 g90424 i0 95.1 2.96341463414634 81 4 98.8 0 2 244 39 119 PYO58535.1 MAG: hypothetical protein DMD83_03570, partial [Candidatus Rokuibacteriota bacterium] diamond 729 172 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;