RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1120203" and tax_kingdom = "Promethearchaeati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 3 ✖

bioproject 1

  • PRJNA1120203 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11752996 11752996 PRJNA1120203_P_NODE_102770_length_242_cov_0.911243_g101754_i0 PRJNA1120203 102770 242 0.911243 2.20520806 Candidatus Heimdallarchaeum endolithica 2876572 Archaea Archaea 76.8 1.29e-9   NTclustered gi|2180470024|gb|CP084167.1| 2876572 g101754 i0 86.765 0.56198347107438 68 9 28 0 1 68 2131527 2131460 MAG: Candidatus Heimdallarchaeum endolithica isolate PR6 chromosome, complete genome blastn 136 76.8 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota Candidatus Heimdallarchaeia (ex Rinke et al. 2021) (nom. nud.) Candidatus Heimdallarchaeales Candidatus Heimdallarchaeaceae Candidatus Heimdallarchaeum Candidatus Heimdallarchaeum endolithica
26626883 26626883 PRJNA1120203_P_NODE_99981_length_243_cov_0.905882_g98965_i0 PRJNA1120203 99981 243 0.905882 2.20129326 Promethearchaeati archaeon 2591838 Archaea Archaea 81.6 2.97e-18   NR MEC8704979.1 2591838 g98965 i0 100 0.469135802469136 38 0 46.9 0 3 116 44 81 MEC8704979.1 hypothetical protein [Promethearchaeati archaeon] diamond 114 81.6 1 Archaea   Promethearchaeati           Promethearchaeati archaeon
27291399 27291399 PRJNA1120203_P_NODE_90523_length_247_cov_0.879310_g89507_i0 PRJNA1120203 90523 247 0.87931 2.1718957 Promethearchaeati archaeon 2591838 Archaea Archaea 162 3.3999999999999997e-48   NR NPD90507.1 2591838 g89507 i0 96.3 0.995951417004049 82 3 99.6 0 1 246 154 235 NPD90507.1 hypothetical protein [Promethearchaeati archaeon] diamond 246 162 1 Archaea   Promethearchaeati           Promethearchaeati archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;