contig_metadata
5 rows where bioproject = "PRJNA1120203", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9203455 | 9203455 | PRJNA1120203_P_NODE_88988_length_247_cov_0.885057_g87972_i0 | PRJNA1120203 | 88988 | 247 | 0.885057 | 2.18609079 | Schistosoma haematobium | 6185 | Platyhelminthes | Platyhelminthes | 183 | 7.59e-42 | NTclustered | gi|2318755038|ref|XM_035733315.2| | 6185 | g87972 | i0 | 87.821 | 5.4331983805668 | 156 | 19 | 63 | 0 | 2 | 157 | 2072 | 1917 | Schistosoma haematobium BTB/POZ domain-containing protein kctd3 (KCTD3_1), partial mRNA | blastn | 1342 | 183 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma haematobium | |
| 17605596 | 17605596 | PRJNA1120203_P_NODE_55514_length_303_cov_1.065217_g54498_i0 | PRJNA1120203 | 55514 | 303 | 1.065217 | 3.22760751 | Metazoa | 33208 | Platyhelminthes | Platyhelminthes | 549 | 8.209999999999997e-152 | NTclustered | gi|60687563|gb|AY914894.1| | 6182 | g54498 | i0 | 99.34 | 100 | 303 | 2 | 100 | 0 | 1 | 303 | 261 | 563 | Schistosoma japonicum unknown mRNA | blastn | 30300 | 549 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma japonicum | |
| 21951309 | 21951309 | PRJNA1120203_P_NODE_12998_length_845_cov_22.281088_g12081_i0 | PRJNA1120203 | 12998 | 845 | 22.281088 | 188.2751936 | Brachycladium goliath | 1751714 | Platyhelminthes | Platyhelminthes | 241 | 1.69e-58 | NTclustered | gi|1011058740|ref|NC_029757.1| | 1751714 | g12081 | i0 | 76.89 | 7.4603550295858 | 463 | 83 | 54 | 18 | 380 | 835 | 2002 | 2447 | Brachycladium goliath voucher NHMUK:2014.9.12.1 mitochondrion, complete genome | blastn | 6304 | 241 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Plagiorchiida | Brachycladiidae | Brachycladium | Brachycladium goliath | |
| 29364707 | 29364707 | PRJNA1120203_P_NODE_101909_length_242_cov_0.911243_g100893_i0 | PRJNA1120203 | 101909 | 242 | 0.911243 | 2.20520806 | Metazoa | 33208 | Platyhelminthes | Platyhelminthes | 47 | 0.00117 | NR | CAH8604239.1 | 57078 | g100893 | i0 | 38 | 1.93388429752066 | 50 | 26 | 57 | 2 | 144 | 7 | 199 | 247 | CAH8604239.1 unnamed protein product [Dicrocoelium dendriticum] | diamond | 468 | 47 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Plagiorchiida | Dicrocoeliidae | Dicrocoelium | Dicrocoelium dendriticum | |
| 31143903 | 31143903 | PRJNA1120203_P_NODE_87415_length_248_cov_0.880000_g86399_i0 | PRJNA1120203 | 87415 | 248 | 0.88 | 2.1824 | Fasciola hepatica | 6192 | Platyhelminthes | Platyhelminthes | 137 | 1.84e-35 | NR | THD22477.1 | 6192 | g86399 | i0 | 78 | 1.98387096774194 | 82 | 18 | 99.2 | 0 | 1 | 246 | 607 | 688 | THD22477.1 Calpain-2 catalytic subunit [Fasciola hepatica] | diamond | 492 | 137 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Plagiorchiida | Fasciolidae | Fasciola | Fasciola hepatica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;