RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120203", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1120203 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24501077 24501077 PRJNA1120203_P_NODE_62180_length_285_cov_2.075472_g61164_i0 PRJNA1120203 62180 285 2.075472 5.9150952 Zoopage sp. 2082960 Fungi Fungi 468 2.21e-127   NTclustered gi|1341128744|gb|MG920182.1| 2082960 g61164 i0 97.786 89.4666666666667 271 6 95 0 1 271 533 803 Zoopage sp. isolate CT small subunit ribosomal RNA gene, partial sequence blastn 25498 468 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Zoopagaceae Zoopage Zoopage sp.
32746138 32746138 PRJNA1120203_P_NODE_92320_length_246_cov_0.890173_g91304_i0 PRJNA1120203 92320 246 0.890173 2.18982558 Syncephalis 78910 Fungi Fungi 103 9.87e-24   NR RKP27732.1 1712513 g91304 i0 57.3 3 82 35 100 0 246 1 343 424 RKP27732.1 hypothetical protein SYNPS1DRAFT_32377 [Syncephalis pseudoplumigaleata] diamond 738 103 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Syncephalis Syncephalis pseudoplumigaleata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;