RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where bioproject = "PRJNA1120203" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 14 ✖

bioproject 1

  • PRJNA1120203 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
275366 275366 PRJNA1120203_P_NODE_78421_length_251_cov_0.865169_g77405_i0 PRJNA1120203 78421 251 0.865169 2.17157419 Micromonas commoda virus 3057169 Viruses Viruses 152 2.18e-32   NTclustered gi|2747347731|gb|PP911589.1| 3057169 g77405 i0 83.636 0.657370517928287 165 24 66 1 86 250 187247 187086 Micromonas commoda virus isolate McV-KB2 genomic sequence blastn 165 152 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
15055894 15055894 PRJNA1120203_P_NODE_89732_length_247_cov_0.885057_g88716_i0 PRJNA1120203 89732 247 0.885057 2.18609079 Prasinovirus 181084 Viruses Viruses 418 1.9099999999999998e-112   NTclustered gi|937663016|gb|KP874736.1| 1663208 g88716 i0 97.166 12.1174089068826 247 7 100 0 1 247 40428 40674 Ostreococcus lucimarinus virus 2 isolate Olv2, complete genome blastn 2993 418 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus lucimarinus virus 2
16330459 16330459 PRJNA1120203_P_NODE_64793_length_280_cov_1.024155_g63777_i0 PRJNA1120203 64793 280 1.024155 2.867634 Prasinovirus 181084 Viruses Viruses 346 1.0599999999999999e-90   NTclustered gi|312599355|gb|HM004431.1| 880162 g63777 i0 89.17 22.9571428571429 277 30 99 0 4 280 178880 178604 Ostreococcus lucimarinus virus OlV1, complete genome blastn 6428 346 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus lucimarinus virus 1
16852960 16852960 PRJNA1120203_P_NODE_99454_length_243_cov_0.905882_g98438_i0 PRJNA1120203 99454 243 0.905882 2.20129326 Micromonas commoda virus 3057169 Viruses Viruses 375 1.14e-99   NTclustered gi|2747347731|gb|PP911589.1| 3057169 g98438 i0 94.628 0.995884773662551 242 13 99 0 1 242 50835 50594 Micromonas commoda virus isolate McV-KB2 genomic sequence blastn 242 375 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
20676399 20676399 PRJNA1120203_P_NODE_51457_length_315_cov_1.272727_g50441_i0 PRJNA1120203 51457 315 1.272727 4.00909005 Micromonas commoda virus 3057169 Viruses Viruses 479 1.1399999999999996e-130   NTclustered gi|2747347731|gb|PP911589.1| 3057169 g50441 i0 94.249 0.993650793650794 313 18 99 0 1 313 108101 107789 Micromonas commoda virus isolate McV-KB2 genomic sequence blastn 313 479 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
20676592 20676592 PRJNA1120203_P_NODE_65817_length_277_cov_1.509804_g64801_i0 PRJNA1120203 65817 277 1.509804 4.18215708 Micromonas commoda virus 3057169 Viruses Viruses 407 4.72e-109   NTclustered gi|2528222004|gb|OQ440139.1| 3057169 g64801 i0 93.141 3 277 19 100 0 1 277 489 213 Micromonas commoda virus isolate McV-KB2 DNA polymerase gene, partial cds blastn 831 407 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
20676949 20676949 PRJNA1120203_P_NODE_89937_length_247_cov_0.885057_g88921_i0 PRJNA1120203 89937 247 0.885057 2.18609079 Ostreococcus tauri virus RT-2011 1120767 Viruses Viruses 180 9.82e-41   NTclustered gi|378706107|gb|JN225873.1| 1120767 g88921 i0 80.426 0.951417004048583 235 46 95 0 1 235 74576 74810 Ostreococcus tauri virus RT-2011, complete genome blastn 235 180 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus tauri virus RT-2011
27228007 27228007 PRJNA1120203_P_NODE_78583_length_251_cov_0.865169_g77567_i0 PRJNA1120203 78583 251 0.865169 2.17157419 Bathycoccus sp. RCC716 virus 1 2530038 Viruses Viruses 112 1.28e-26   NR QOR60232.1 2530038 g77567 i0 60.2 0.99203187250996006 83 33 99.2 0 250 2 47 129 QOR60232.1 hypothetical protein [Bathycoccus sp. RCC716 virus 1] diamond 249 112 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Bathycoccus sp. RCC716 virus 1
29659082 29659082 PRJNA1120203_P_NODE_83690_length_249_cov_0.875000_g82674_i0 PRJNA1120203 83690 249 0.875 2.17875 Bathycoccus sp. RCC11 2812571 Viruses Viruses 126 1.49e-32   NR YP_004061516.1 880159 g82674 i0 72.3 1 83 23 100 0 1 249 290 372 YP_004061516.1 hypothetical protein BpV1_086c [Bathycoccus sp. RCC1105 virus BpV1] diamond 249 126 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Bathycoccus sp. RCC1105 virus BpV
29817206 29817206 PRJNA1120203_P_NODE_94451_length_245_cov_0.895349_g93435_i0 PRJNA1120203 94451 245 0.895349 2.19360505 Ostreococcus tauri virus 2 696472 Viruses Viruses 78.6 2.02e-16   NR YP_004063629.1 696472 g93435 i0 74.4 0.52653061224489806 43 11 52.7 0 1 129 92 134 YP_004063629.1 hypothetical protein OtV2_196 [Ostreococcus tauri virus 2] diamond 129 78.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus tauri virus 2
30101533 30101533 PRJNA1120203_P_NODE_86932_length_248_cov_0.880000_g85916_i0 PRJNA1120203 86932 248 0.88 2.1824 Dishui Lake phycodnavirus 4 2704072 Viruses Viruses 48.1 5.18e-4   NR QIG60002.1 2704072 g85916 i0 48 0.604838709677419 50 25 60.5 1 230 81 6600 6648 QIG60002.1 glycoprotein repeat domain-containing protein [Dishui Lake phycodnavirus 4] diamond 150 48.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Dishui Lake phycodnavirus 4
31460762 31460762 PRJNA1120203_P_NODE_104656_length_241_cov_0.916667_g103640_i0 PRJNA1120203 104656 241 0.916667 2.20916747 Micromonas commoda virus 3057169 Viruses Viruses 158 1.5199999999999999e-46   NR XDR79876.1 3057169 g103640 i0 87.5 0.995850622406639 80 10 99.6 0 240 1 147 226 XDR79876.1 hypothetical protein [Micromonas commoda virus] diamond 240 158 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
32504760 32504760 PRJNA1120203_P_NODE_88779_length_247_cov_0.885057_g87763_i0 PRJNA1120203 88779 247 0.885057 2.18609079 Bathycoccus sp. RCC716 virus 2 2530039 Viruses Viruses 112 1.01e-27   NR QOR60448.1 2530039 g87763 i0 70.4 0.862348178137652 71 21 86.2 0 213 1 1 71 QOR60448.1 hypothetical protein [Bathycoccus sp. RCC716 virus 2] diamond 213 112 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Bathycoccus sp. RCC716 virus 2
32693683 32693683 PRJNA1120203_P_NODE_78180_length_251_cov_0.960674_g77164_i0 PRJNA1120203 78180 251 0.960674 2.41129174 Micromonas polaris virus 2008368 Viruses Viruses 66.6 4.34e-12   NR XCJ77218.1 2008368 g77164 i0 66 0.597609561752988 50 17 59.8 0 150 1 1 50 XCJ77218.1 hypothetical protein [Micromonas polaris virus] diamond 150 66.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas polaris virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;