RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1120203", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA1120203 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26869754 26869754 PRJNA1120203_P_NODE_68181_length_272_cov_1.402010_g67165_i0 PRJNA1120203 68181 272 1.40201 3.8134672 Bacteria 2 Bacteria Bacteria 170 5.77e-48   NR HEV3405668.1 2052315 g67165 i0 78.9 1.98529411764706 90 19 99.3 0 1 270 350 439 HEV3405668.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 540 170 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
28354186 28354186 PRJNA1120203_P_NODE_81966_length_250_cov_0.870056_g80950_i0 PRJNA1120203 81966 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 79.7 3.47e-15   NR HXP71002.1 2052315 g80950 i0 53.8 2.88 80 37 96 0 3 242 18 97 HXP71002.1 ATP-binding protein [Candidatus Dormiibacterota bacterium] diamond 720 79.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31365840 31365840 PRJNA1120203_P_NODE_102996_length_242_cov_0.911243_g101980_i0 PRJNA1120203 102996 242 0.911243 2.20520806 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 163 5.14e-47   NR HVA18528.1 2052315 g101980 i0 93.8 3.96694214876033 80 5 99.2 0 1 240 138 217 HVA18528.1 citrate/2-methylcitrate synthase [Candidatus Dormiibacterota bacterium] diamond 960 163 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;