RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1120203", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1120203 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27575647 27575647 PRJNA1120203_P_NODE_92944_length_246_cov_0.890173_g91928_i0 PRJNA1120203 92944 246 0.890173 2.18982558 Adineta ricciae 249248 Rotifera other_Eukaryota 142 2.44e-37   NR CAF0879484.1 249248 g91928 i0 96.2 0.963414634146341 79 3 96.3 0 237 1 1 79 CAF0879484.1 unnamed protein product [Adineta ricciae] diamond 237 142 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
30575362 30575362 PRJNA1120203_P_NODE_87933_length_248_cov_0.880000_g86917_i0 PRJNA1120203 87933 248 0.88 2.1824 Adineta vaga 104782 Rotifera other_Eukaryota 69.7 1.27e-11   NR UJR32727.1 104782 g86917 i0 42.9 0.931451612903226 77 41 90.7 2 242 18 122 197 UJR32727.1 hypothetical protein I4U23_020186 [Adineta vaga] diamond 231 69.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31039100 31039100 PRJNA1120203_P_NODE_87335_length_248_cov_0.880000_g86319_i0 PRJNA1120203 87335 248 0.88 2.1824 Philodinidae 44580 Rotifera other_Eukaryota 61.2 1.2e-8   NR CAF3973101.1 392033 g86319 i0 38.4 6.25403225806452 73 45 88.3 0 10 228 20 92 CAF3973101.1 unnamed protein product [Rotaria sordida] diamond 1551 61.6 0.993506493506494 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;