RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120203", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA1120203 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29627454 29627454 PRJNA1120203_P_NODE_80950_length_250_cov_0.870056_g79934_i0 PRJNA1120203 80950 250 0.870056 2.17514 Nitrospinota bacterium 2026769 Bacteria Bacteria 79.7 2.9e-15   NR MDP6482616.1 2026769 g79934 i0 86.8 0.9 38 5 45.6 0 137 250 1 38 MDP6482616.1 LLM class flavin-dependent oxidoreductase [Nitrospinota bacterium] diamond 225 79.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
31460778 31460778 PRJNA1120203_P_NODE_84056_length_249_cov_0.875000_g83040_i0 PRJNA1120203 84056 249 0.875 2.17875 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 130 1.59e-33   NR MCY4513839.1 2528274 g83040 i0 72 2.96385542168675 82 23 98.8 0 247 2 121 202 MCY4513839.1 TldD/PmbA family protein [Candidatus Tectimicrobiota bacterium] diamond 738 130 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;