RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1120203", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA1120203 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22705046 22705046 PRJNA1120203_P_NODE_84498_length_249_cov_0.875000_g83482_i0 PRJNA1120203 84498 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 82.4 2.87e-11   NTclustered gi|2893358454|emb|OZ220746.1| 2306054 g83482 i0 79.825 3.49397590361446 114 21 45 2 7 119 9650 9538 MAG: Rhodothermales bacterium isolate 9cc831bd-bc70-4893-94b0-cd5ea3f684b8 genome assembly, chromosome: 1 blastn 870 82.4 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
26943415 26943415 PRJNA1120203_P_NODE_99262_length_243_cov_0.905882_g98246_i0 PRJNA1120203 99262 243 0.905882 2.20129326 Rhodothermales bacterium 2306054 Bacteria Bacteria 161 7.49e-44   NR MFT5127496.1 2306054 g98246 i0 95.1 3 81 4 100 0 243 1 518 598 MFT5127496.1 mono/diheme cytochrome c family protein [Rhodothermales bacterium] diamond 729 161 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
28364772 28364772 PRJNA1120203_P_NODE_79466_length_251_cov_0.865169_g78450_i0 PRJNA1120203 79466 251 0.865169 2.17157419 Rhodothermales bacterium 2306054 Bacteria Bacteria 107 5.64e-26   NR MDX1547140.1 2306054 g78450 i0 65.1 3.9681274900398402 83 29 99.2 0 250 2 51 133 MDX1547140.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Rhodothermales bacterium] diamond 996 107 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
29501487 29501487 PRJNA1120203_P_NODE_101750_length_242_cov_0.911243_g100734_i0 PRJNA1120203 101750 242 0.911243 2.20520806 Rhodothermales bacterium 2306054 Bacteria Bacteria 86.3 1.75e-17   NR HUF11001.1 2306054 g100734 i0 75.5 0.607438016528926 49 12 60.7 0 1 147 767 815 HUF11001.1 cytochrome c biogenesis protein CcsA [Rhodothermales bacterium] diamond 147 86.3 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;