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contig_metadata

8 rows where bioproject = "PRJNA1120203", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 8 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 8 ✖

bioproject 1

  • PRJNA1120203 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4855500 4855500 PRJNA1120203_P_NODE_103264_length_242_cov_0.911243_g102248_i0 PRJNA1120203 103264 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 156 6.75e-44   NR MEL1225074.1 2026760 g102248 i0 100 1.98347107438017 80 0 99.2 0 3 242 85 164 MEL1225074.1 translation elongation factor 4 [Fidelibacterota bacterium] diamond 480 156 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
7928322 7928322 PRJNA1120203_P_NODE_82327_length_250_cov_0.870056_g81311_i0 PRJNA1120203 82327 250 0.870056 2.17514 Fidelibacterota bacterium 2026760 Bacteria Bacteria 165 1.49e-49   NR GIR30043.1 2026760 g81311 i0 97.6 0.996 83 2 99.6 0 250 2 134 216 GIR30043.1 MAG: PqqC-like protein [Fidelibacterota bacterium] diamond 249 165 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
14304215 14304215 PRJNA1120203_P_NODE_77832_length_251_cov_1.651685_g76816_i0 PRJNA1120203 77832 251 1.651685 4.14572935 Fidelibacterota bacterium 2026760 Bacteria Bacteria 142 2.41e-38   NR MCH8837149.1 2026760 g76816 i0 77.1 7.87649402390438 83 19 99.2 0 2 250 17 99 MCH8837149.1 citrate synthase [Fidelibacterota bacterium] diamond 1977 142 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
26658346 26658346 PRJNA1120203_P_NODE_94841_length_245_cov_0.895349_g93825_i0 PRJNA1120203 94841 245 0.895349 2.19360505 Fidelibacterota bacterium 2026760 Bacteria Bacteria 157 7.77e-45   NR MDA9716255.1 2026760 g93825 i0 98.7 0.96734693877551 79 1 96.7 0 2 238 67 145 MDA9716255.1 phosphoribosylformylglycinamidine cyclo-ligase [Fidelibacterota bacterium] diamond 237 157 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28144146 28144146 PRJNA1120203_P_NODE_89305_length_247_cov_0.885057_g88289_i0 PRJNA1120203 89305 247 0.885057 2.18609079 Fidelibacterota bacterium 2026760 Bacteria Bacteria 166 4.08e-48   NR MEL1225318.1 2026760 g88289 i0 100 0.995951417004049 82 0 99.6 0 246 1 21 102 MEL1225318.1 3-phosphoserine/phosphohydroxythreonine transaminase [Fidelibacterota bacterium] diamond 246 166 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31808491 31808491 PRJNA1120203_P_NODE_97177_length_244_cov_0.900585_g96161_i0 PRJNA1120203 97177 244 0.900585 2.1974274 Fidelibacterota bacterium 2026760 Bacteria Bacteria 152 1.35e-45   NR MAJ19829.1 2026760 g96161 i0 98.8 1.9672131147541 80 1 98.4 0 240 1 1 80 MAJ19829.1 50S ribosomal protein L14 [Fidelibacterota bacterium] diamond 480 152 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32378072 32378072 PRJNA1120203_P_NODE_105079_length_241_cov_0.916667_g104063_i0 PRJNA1120203 105079 241 0.916667 2.20916747 Fidelibacterota bacterium 2026760 Bacteria Bacteria 154 4.49e-43   NR GIR19063.1 2026760 g104063 i0 100 0.995850622406639 80 0 99.6 0 1 240 244 323 GIR19063.1 MAG: replicative DNA helicase [Fidelibacterota bacterium] diamond 240 154 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32599411 32599411 PRJNA1120203_P_NODE_91680_length_246_cov_0.890173_g90664_i0 PRJNA1120203 91680 246 0.890173 2.18982558 Fidelibacterota bacterium 2026760 Bacteria Bacteria 129 6.51e-34   NR MBO01735.1 2026760 g90664 i0 85.2 0.98780487804878 81 12 98.8 0 244 2 261 341 MBO01735.1 phosphate ABC transporter, permease protein PstA [Fidelibacterota bacterium] diamond 243 129 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;