RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120203", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA1120203 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19400977 19400977 PRJNA1120203_P_NODE_59236_length_292_cov_1.552511_g58220_i0 PRJNA1120203 59236 292 1.552511 4.53333212 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 243 1.5e-59   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g58220 i0 81.818 51.6643835616438 297 47 100 6 1 292 3681222 3680928 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 15086 243 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
21952051 21952051 PRJNA1120203_P_NODE_71198_length_265_cov_2.218750_g70182_i0 PRJNA1120203 71198 265 2.21875 5.8796875 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 257 4.78e-64   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g70182 i0 84.351 2.99245283018868 262 41 99 0 1 262 1350677 1350416 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 793 257 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;