RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where bioproject = "PRJNA1120203", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 24 ✖

tax_clade 1

  • Bacteria candidate phyla · 24 ✖

bioproject 1

  • PRJNA1120203 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11231534 11231534 PRJNA1120203_P_NODE_94709_length_245_cov_0.895349_g93693_i0 PRJNA1120203 94709 245 0.895349 2.19360505 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 147 4.329999999999999e-42   NR HLK86028.1 2785449 g93693 i0 95.1 1.98367346938776 81 4 99.2 0 3 245 109 189 HLK86028.1 type III pantothenate kinase [Candidatus Binataceae bacterium] diamond 486 147 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
11754155 11754155 PRJNA1120203_P_NODE_96530_length_244_cov_0.900585_g95514_i0 PRJNA1120203 96530 244 0.900585 2.1974274 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 117 5.430000000000001e-29   NR HKM98934.1 2785449 g95514 i0 72.2 2.72950819672131 72 20 88.5 0 216 1 6 77 HKM98934.1 dienelactone hydrolase family protein [Candidatus Binataceae bacterium] diamond 666 117 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
13029097 13029097 PRJNA1120203_P_NODE_78931_length_251_cov_0.865169_g77915_i0 PRJNA1120203 78931 251 0.865169 2.17157419 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 147 3.25e-42   NR HET9064183.1 2838779 g77915 i0 93.9 0.9800796812749 82 5 98 0 248 3 74 155 HET9064183.1 ATP-binding cassette domain-containing protein [Candidatus Binatia bacterium] diamond 246 147 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
19401335 19401335 PRJNA1120203_P_NODE_84616_length_249_cov_0.875000_g83600_i0 PRJNA1120203 84616 249 0.875 2.17875 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 71.3 6.22e-8   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g83600 i0 97.561 264.538152610442 41 1 20 0 64 104 2066051 2066011 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 65870 71.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
19401430 19401430 PRJNA1120203_P_NODE_90756_length_246_cov_1.502890_g89740_i0 PRJNA1120203 90756 246 1.50289 3.6971094 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 96.7 1.21e-22   NR HEY7323138.1 2838779 g89740 i0 93.5 0.560975609756098 46 3 56.1 0 246 109 170 215 HEY7323138.1 cytochrome c oxidase subunit 3 family protein [Candidatus Binatia bacterium] diamond 138 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
21952326 21952326 PRJNA1120203_P_NODE_89078_length_247_cov_0.885057_g88062_i0 PRJNA1120203 89078 247 0.885057 2.18609079 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 142 9.959999999999999e-39   NR HVI10566.1 2838779 g88062 i0 86.4 3.89878542510121 81 11 98.4 0 3 245 197 277 HVI10566.1 PilT/PilU family type 4a pilus ATPase [Candidatus Binatia bacterium] diamond 963 142 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
25254461 25254461 PRJNA1120203_P_NODE_81520_length_250_cov_0.870056_g80504_i0 PRJNA1120203 81520 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 132 4.48e-34   NR MFQ5902690.1 2838779 g80504 i0 79.5 0.996 83 17 99.6 0 250 2 134 216 MFQ5902690.1 DEAD/DEAH box helicase [Candidatus Binatia bacterium] diamond 249 132 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
26595017 26595017 PRJNA1120203_P_NODE_88021_length_247_cov_2.379310_g87005_i0 PRJNA1120203 88021 247 2.37931 5.8768957 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 150 1.13e-42   NR HVA84446.1 2785449 g87005 i0 92.7 1.9919028340081 82 6 99.6 0 247 2 127 208 HVA84446.1 tRNA pseudouridine(55) synthase TruB [Candidatus Binataceae bacterium] diamond 492 150 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
26911802 26911802 PRJNA1120203_P_NODE_83582_length_249_cov_0.875000_g82566_i0 PRJNA1120203 83582 249 0.875 2.17875 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 147 2.94e-42   NR HXJ89918.1 2838779 g82566 i0 82.7 2.92771084337349 81 14 97.6 0 2 244 102 182 HXJ89918.1 glycosyltransferase family 2 protein [Candidatus Binatia bacterium] diamond 729 147 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
26911811 26911811 PRJNA1120203_P_NODE_94702_length_245_cov_0.895349_g93686_i0 PRJNA1120203 94702 245 0.895349 2.19360505 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 90.1 2.41e-19   NR MFQ5352091.1 2838779 g93686 i0 62.2 1.00408163265306 82 27 98 2 6 245 113 192 MFQ5352091.1 50S ribosomal protein L15 [Candidatus Binatia bacterium] diamond 246 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28617703 28617703 PRJNA1120203_P_NODE_70407_length_267_cov_1.556701_g69391_i0 PRJNA1120203 70407 267 1.556701 4.15639167 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 104 2.9199999999999998e-24   NR HMA80106.1 2838779 g69391 i0 63.6 2.96629213483146 88 32 98.9 0 266 3 64 151 HMA80106.1 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha [Candidatus Binatia bacterium] diamond 792 104 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28996714 28996714 PRJNA1120203_P_NODE_81708_length_250_cov_0.870056_g80692_i0 PRJNA1120203 81708 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 102 1.26e-24   NR MEO6025491.1 2838779 g80692 i0 82.3 0.744 62 11 74.4 0 65 250 1 62 MEO6025491.1 sterol desaturase family protein [Candidatus Binatia bacterium] diamond 186 102 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29375286 29375286 PRJNA1120203_P_NODE_105569_length_241_cov_0.916667_g104553_i0 PRJNA1120203 105569 241 0.916667 2.20916747 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 154 2.3e-44   NR HEX9787636.1 2838779 g104553 i0 93.7 3.97095435684647 79 5 98.3 0 1 237 66 144 HEX9787636.1 radical SAM family heme chaperone HemW [Candidatus Binatia bacterium] diamond 957 154 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29375309 29375309 PRJNA1120203_P_NODE_99829_length_243_cov_0.905882_g98813_i0 PRJNA1120203 99829 243 0.905882 2.20129326 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 116 1.14e-28   NR HUY20623.1 2785449 g98813 i0 81 0.975308641975309 79 15 97.5 0 241 5 237 315 HUY20623.1 ATP-binding protein [Candidatus Binataceae bacterium] diamond 237 116 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30259894 30259894 PRJNA1120203_P_NODE_82252_length_250_cov_0.870056_g81236_i0 PRJNA1120203 82252 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 66.6 1.59e-10   NR MFN2376620.1 2838779 g81236 i0 43.1 0.864 72 40 85.2 1 214 2 663 734 MFN2376620.1 TolC family protein [Candidatus Binatia bacterium] diamond 216 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30480904 30480904 PRJNA1120203_P_NODE_81393_length_250_cov_0.870056_g80377_i0 PRJNA1120203 81393 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 141 5.98e-37   NR HXU49957.1 2838779 g80377 i0 92.3 0.936 78 6 93.6 0 16 249 1 78 HXU49957.1 amino acid permease [Candidatus Binatia bacterium] diamond 234 141 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30512375 30512375 PRJNA1120203_P_NODE_85293_length_249_cov_0.875000_g84277_i0 PRJNA1120203 85293 249 0.875 2.17875 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 162 9.34e-46   NR HSC42671.1 2838779 g84277 i0 96.3 0.987951807228916 82 3 98.8 0 2 247 98 179 HSC42671.1 glucose-6-phosphate dehydrogenase [Candidatus Binatia bacterium] diamond 246 162 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30828338 30828338 PRJNA1120203_P_NODE_86154_length_248_cov_0.880000_g85138_i0 PRJNA1120203 86154 248 0.88 2.1824 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 132 6.019999999999998e-35   NR HTQ25779.1 2785449 g85138 i0 85.4 1.98387096774194 82 12 99.2 0 247 2 60 141 HTQ25779.1 HlyD family secretion protein [Candidatus Binataceae bacterium] diamond 492 132 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30828343 30828343 PRJNA1120203_P_NODE_91234_length_246_cov_0.890173_g90218_i0 PRJNA1120203 91234 246 0.890173 2.18982558 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 147 4.229999999999999e-42   NR MEO6026379.1 2838779 g90218 i0 92.6 0.98780487804878 81 6 98.8 0 2 244 152 232 MEO6026379.1 glycosyltransferase family 2 protein [Candidatus Binatia bacterium] diamond 243 147 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30859930 30859930 PRJNA1120203_P_NODE_104394_length_241_cov_0.916667_g103378_i0 PRJNA1120203 104394 241 0.916667 2.20916747 Candidatus Binatus sp. 2811406 Bacteria Bacteria 124 6.63e-33   NR HZD12409.1 2811406 g103378 i0 77.5 2.98755186721992 80 18 99.6 0 1 240 139 218 HZD12409.1 DUF2110 family protein [Candidatus Binatus sp.] diamond 720 124 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.
31049830 31049830 PRJNA1120203_P_NODE_76975_length_253_cov_1.327778_g75959_i0 PRJNA1120203 76975 253 1.327778 3.35927834 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 147 7.24e-40   NR HET7006008.1 2838779 g75959 i0 85.7 0.99604743083004 84 12 99.6 0 2 253 40 123 HET7006008.1 hypothetical protein [Candidatus Binatia bacterium] diamond 252 147 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31492347 31492347 PRJNA1120203_P_NODE_97856_length_244_cov_0.900585_g96840_i0 PRJNA1120203 97856 244 0.900585 2.1974274 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 144 7.23e-40   NR HEX9144400.1 2838779 g96840 i0 91.4 5.96311475409836 81 7 99.6 0 2 244 67 147 HEX9144400.1 ABC transporter substrate-binding protein [Candidatus Binatia bacterium] diamond 1455 144 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31650098 31650098 PRJNA1120203_P_NODE_100057_length_243_cov_0.905882_g99041_i0 PRJNA1120203 100057 243 0.905882 2.20129326 Candidatus Binatota bacterium 2528255 Bacteria Bacteria 136 8.37e-39   NR MEK6614397.1 2528255 g99041 i0 77.5 1.97530864197531 80 18 98.8 0 2 241 27 106 MEK6614397.1 XRE family transcriptional regulator [Candidatus Binatota bacterium] diamond 480 136 1 Bacteria Bacteria candidate phyla   Candidatus Binatota         Candidatus Binatota bacterium
32335866 32335866 PRJNA1120203_P_NODE_92299_length_246_cov_0.890173_g91283_i0 PRJNA1120203 92299 246 0.890173 2.18982558 Candidatus Binatus 2767079 Bacteria Bacteria 121 8.46e-30   NR HYR95932.1 2811406 g91283 i0 77.8 2.95121951219512 81 18 98.8 0 2 244 63 143 HYR95932.1 1-acyl-sn-glycerol-3-phosphate acyltransferase [Candidatus Binatus sp.] diamond 726 121 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;