RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120203", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA1120203 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15577722 15577722 PRJNA1120203_P_NODE_41913_length_351_cov_1.658273_g40898_i0 PRJNA1120203 41913 351 1.658273 5.82053823 Diderma niveum 372584 Evosea other_Eukaryota 263 1.41e-65   NTclustered gi|381140154|emb|HE655061.1| 372584 g40898 i0 81.073 57.022792022792 354 46 99 17 1 348 3360 3022 Diderma niveum partial 28S rRNA gene, isolate Uk-K79 blastn 20015 263 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Diderma Diderma niveum
32145808 32145808 PRJNA1120203_P_NODE_97638_length_244_cov_0.900585_g96622_i0 PRJNA1120203 97638 244 0.900585 2.1974274 Eumycetozoa 142796 Evosea other_Eukaryota 65.5 3.6e-10   NR XP_003285820.1 5786 g96622 i0 38.7 2.27459016393443 62 36 76.2 1 242 57 773 832 XP_003285820.1 uncharacterized protein DICPUDRAFT_149727 [Dictyostelium purpureum] diamond 555 65.9 0.993930197268589 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;