RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1120060" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6643329 6643329 PRJNA1120060_P_NODE_400846_length_388_cov_6.326984_g383426_i0 PRJNA1120060 400846 388 6.326984 24.54869792 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 59.3 3.08e-8   NR MCD6276739.1 2052148 g383426 i0 60.4 0.371134020618557 48 19 37.1 0 146 3 4 51 MCD6276739.1 ribonuclease HI family protein [candidate division WOR-3 bacterium] diamond 144 59.3 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
27099876 27099876 PRJNA1120060_P_NODE_1436382_length_296_cov_3.475336_g1418398_i0 PRJNA1120060 1436382 296 3.475336 10.28699456 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 43.5 0.0386   NR MBN2381232.1 2052148 g1418398 i0 35.9 0.790540540540541 78 44 75 2 238 17 972 1047 MBN2381232.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 234 43.5 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
29248351 29248351 PRJNA1120060_P_NODE_3104749_length_236_cov_2.110429_g3086648_i0 PRJNA1120060 3104749 236 2.110429 4.98061244 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 45.8 9.4e-4   NR MCD6276739.1 2052148 g3086648 i0 44.9 0.622881355932203 49 27 62.3 0 79 225 43 91 MCD6276739.1 ribonuclease HI family protein [candidate division WOR-3 bacterium] diamond 147 45.8 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
29468713 29468713 PRJNA1120060_P_NODE_2551490_length_252_cov_2.162011_g2533415_i0 PRJNA1120060 2551490 252 2.162011 5.44826772 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 42.7 0.0418   NR MEO0205862.1 2052148 g2533415 i0 35.6 1.03571428571429 87 43 91.7 3 18 248 5 88 MEO0205862.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 261 42.7 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31301203 31301203 PRJNA1120060_P_NODE_2227855_length_264_cov_1.329843_g2209802_i0 PRJNA1120060 2227855 264 1.329843 3.51078552 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 43.1 0.0347   NR MEO0266725.1 2052148 g2209802 i0 35.8 2.40909090909091 53 30 60.2 1 10 168 285 333 MEO0266725.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 636 43.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31332526 31332526 PRJNA1120060_P_NODE_1877696_length_277_cov_5.558824_g1859677_i0 PRJNA1120060 1877696 277 5.558824 15.39794248 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 42 0.0445   NR HAV91720.1 2052148 g1859677 i0 33.3 0.747292418772563 69 44 72.6 1 66 266 24 92 HAV91720.1 hypothetical protein [candidate division WOR-3 bacterium] diamond 207 42 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;