contig_metadata
51 rows where bioproject = "PRJNA1120060", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 269201 | 269201 | PRJNA1120060_P_NODE_636041_length_343_cov_1.225926_g618279_i0 | PRJNA1120060 | 636041 | 343 | 1.225926 | 4.20492618 | Taiwan douglas-fir deltapartitivirus | 2933092 | Viruses | Viruses | 67 | 3.51e-10 | NR | CAI5384001.1 | 2933092 | g618279 | i0 | 61.1 | 0.472303206997085 | 54 | 18 | 47.2 | 1 | 178 | 17 | 128 | 178 | CAI5384001.1 RNA-dependent RNA polymerase [Taiwan douglas-fir deltapartitivirus] | diamond | 162 | 67 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Deltapartitivirus | Taiwan douglas-fir deltapartitivirus | ||
| 271021 | 271021 | PRJNA1120060_P_NODE_766721_length_324_cov_4.549801_g748854_i0 | PRJNA1120060 | 766721 | 324 | 4.549801 | 14.74135524 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 95.3 | 4.99e-15 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g748854 | i0 | 96.552 | 5.16975308641975 | 58 | 1 | 18 | 1 | 268 | 324 | 115 | 58 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 1675 | 95.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1529375 | 1529375 | PRJNA1120060_P_NODE_2701662_length_248_cov_2.834286_g2683579_i0 | PRJNA1120060 | 2701662 | 248 | 2.834286 | 7.02902928 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 97.1 | 1.02e-15 | NTclustered | gi|2165836382|emb|OV196890.1| | 2697049 | g2683579 | i0 | 92.647 | 1.79032258064516 | 68 | 4 | 27 | 1 | 181 | 248 | 117 | 51 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 444 | 97.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1535007 | 1535007 | PRJNA1120060_P_NODE_3201042_length_231_cov_3.683544_g3182935_i0 | PRJNA1120060 | 3201042 | 231 | 3.683544 | 8.50898664 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 117 | 7.22e-22 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g3182935 | i0 | 97.143 | 31.8095238095238 | 70 | 1 | 30 | 1 | 159 | 227 | 221 | 152 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7348 | 117 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 1542149 | 1542149 | PRJNA1120060_P_NODE_538482_length_359_cov_2.912587_g520824_i0 | PRJNA1120060 | 538482 | 359 | 2.912587 | 10.45618733 | Novo Mesto iflavirus 1 | 2950846 | Viruses | Viruses | 54.7 | 0.009 | NTclustered | gi|2273760668|gb|OL472192.1| | 2950846 | g520824 | i0 | 100 | 0.0807799442896936 | 29 | 0 | 8 | 0 | 109 | 137 | 4554 | 4526 | MAG: Novo Mesto iflavirus 1 isolate TUR20SW, complete genome | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Novo Mesto iflavirus 1 | ||
| 4082362 | 4082362 | PRJNA1120060_P_NODE_2760844_length_247_cov_1.109195_g2742760_i0 | PRJNA1120060 | 2760844 | 247 | 1.109195 | 2.73971165 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 89.8 | 1.7e-13 | NTclustered | gi|2165835426|emb|OV196492.1| | 2697049 | g2742760 | i0 | 90.278 | 31.8744939271255 | 72 | 2 | 28 | 5 | 175 | 242 | 254 | 184 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7873 | 89.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4091439 | 4091439 | PRJNA1120060_P_NODE_3580784_length_200_cov_5.543307_g3562657_i0 | PRJNA1120060 | 3580784 | 200 | 5.543307 | 11.086614 | Fish-associated picorna-like virus 3 | 3003959 | Viruses | Viruses | 54.7 | 0.005 | NTclustered | gi|2214231791|gb|OM622361.1| | 3003959 | g3562657 | i0 | 100 | 0.145 | 29 | 0 | 15 | 0 | 67 | 95 | 4867 | 4839 | MAG: Picornavirales sp. isolate HPLV-106 genomic sequence | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 3 | ||||
| 4093343 | 4093343 | PRJNA1120060_P_NODE_450724_length_377_cov_1.598684_g433202_i0 | PRJNA1120060 | 450724 | 377 | 1.598684 | 6.02703868 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 102 | 3.52e-17 | NTclustered | gi|2165834592|emb|OV196099.1| | 2697049 | g433202 | i0 | 92.958 | 22.0079575596817 | 71 | 4 | 19 | 1 | 1 | 71 | 47 | 116 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8297 | 102 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 4854182 | 4854182 | PRJNA1120060_P_NODE_2496264_length_254_cov_1.585635_g2478193_i0 | PRJNA1120060 | 2496264 | 254 | 1.585635 | 4.0275129 | Viruses | 10239 | Viruses | Viruses | 100 | 8.12e-17 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g2478193 | i0 | 92.857 | 40.9685039370079 | 70 | 4 | 27 | 1 | 182 | 250 | 221 | 152 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 10406 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 5364674 | 5364674 | PRJNA1120060_P_NODE_3292565_length_227_cov_3.448052_g3274457_i0 | PRJNA1120060 | 3292565 | 227 | 3.448052 | 7.82707804 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 102 | 1.98e-17 | NTclustered | gi|2165835422|emb|OV196488.1| | 2697049 | g3274457 | i0 | 93.056 | 41.6740088105727 | 72 | 2 | 31 | 3 | 7 | 76 | 48 | 118 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 9460 | 102 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6627225 | 6627225 | PRJNA1120060_P_NODE_2271186_length_262_cov_2.285714_g2253131_i0 | PRJNA1120060 | 2271186 | 262 | 2.285714 | 5.98857068 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 99 | 3.03e-16 | NTclustered | gi|2165834592|emb|OV196099.1| | 2697049 | g2253131 | i0 | 91.667 | 0.83206106870229 | 72 | 5 | 27 | 1 | 188 | 258 | 118 | 47 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 218 | 99 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6627998 | 6627998 | PRJNA1120060_P_NODE_2328486_length_260_cov_1.860963_g2310426_i0 | PRJNA1120060 | 2328486 | 260 | 1.860963 | 4.8385038 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 115 | 2.98e-21 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g2310426 | i0 | 97.101 | 1.05769230769231 | 69 | 1 | 26 | 1 | 193 | 260 | 223 | 155 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 275 | 115 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 6630583 | 6630583 | PRJNA1120060_P_NODE_2526746_length_253_cov_1.433333_g2508674_i0 | PRJNA1120060 | 2526746 | 253 | 1.433333 | 3.62633249 | Potyvirus sorghitessellati | 3240613 | Viruses | Viruses | 56.5 | 0.002 | NTclustered | gi|2199183791|gb|MZ419639.1| | 32619 | g2508674 | i0 | 94.444 | 0.142292490118577 | 36 | 2 | 14 | 0 | 37 | 72 | 110 | 75 | Sorghum mosaic virus isolate SrMV-GZWM008 polyprotein gene, partial cds | blastn | 36 | 56.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Potyvirus | Potyvirus sorghitessellati | ||
| 7889862 | 7889862 | PRJNA1120060_P_NODE_1375947_length_299_cov_2.389381_g1357970_i0 | PRJNA1120060 | 1375947 | 299 | 2.389381 | 7.14424919 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 99 | 3.52e-16 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g1357970 | i0 | 96.667 | 0.471571906354515 | 60 | 1 | 28 | 1 | 1 | 59 | 162 | 221 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 141 | 99 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 7898585 | 7898585 | PRJNA1120060_P_NODE_1999147_length_273_cov_1.070000_g1981119_i0 | PRJNA1120060 | 1999147 | 273 | 1.07 | 2.9211 | Ripifrik virus | 3131349 | Viruses | Viruses | 54.7 | 0.007 | NTclustered | gi|2717322287|gb|PP173651.1| | 3131349 | g1981119 | i0 | 100 | 0.106227106227106 | 29 | 0 | 11 | 0 | 214 | 242 | 6731 | 6703 | MAG: Ripifrik virus isolate MP3_k141_42876 genomic sequence | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Marnaviridae | Ripifrik virus | |||
| 9181834 | 9181834 | PRJNA1120060_P_NODE_2637768_length_250_cov_1.276836_g2619688_i0 | PRJNA1120060 | 2637768 | 250 | 1.276836 | 3.19209 | Moss associated polycipi-like virus | 3068246 | Viruses | Viruses | 52.8 | 0.023 | NTclustered | gi|2626077857|gb|OQ987813.1| | 3068246 | g2619688 | i0 | 100 | 0.112 | 28 | 0 | 11 | 0 | 211 | 238 | 68 | 95 | MAG: Moss associated polycipi-like virus isolate DICBIL genomic sequence | blastn | 28 | 52.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Polycipiviridae | Moss associated polycipi-like virus | |||
| 10465058 | 10465058 | PRJNA1120060_P_NODE_3300329_length_227_cov_2.461039_g3282221_i0 | PRJNA1120060 | 3300329 | 227 | 2.461039 | 5.58655853 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 106 | 1.53e-18 | NTclustered | gi|2165835007|emb|OV196275.1| | 2697049 | g3282221 | i0 | 93.243 | 46.0044052863436 | 74 | 2 | 32 | 3 | 155 | 227 | 197 | 126 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 10443 | 106 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 10470023 | 10470023 | PRJNA1120060_P_NODE_460989_length_374_cov_5.308970_g443433_i0 | PRJNA1120060 | 460989 | 374 | 5.30897 | 19.8555478 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 121 | 9.62e-23 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g443433 | i0 | 92.857 | 23.0454545454545 | 84 | 4 | 22 | 2 | 10 | 92 | 29981 | 29899 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8619 | 121 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 10472496 | 10472496 | PRJNA1120060_P_NODE_627069_length_344_cov_2.900369_g609312_i0 | PRJNA1120060 | 627069 | 344 | 2.900369 | 9.97726936 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 93.5 | 1.92e-14 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g609312 | i0 | 96.491 | 0.369186046511628 | 57 | 1 | 19 | 1 | 129 | 184 | 115 | 59 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 127 | 93.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11712037 | 11712037 | PRJNA1120060_P_NODE_1127610_length_311_cov_2.689076_g1109675_i0 | PRJNA1120060 | 1127610 | 311 | 2.689076 | 8.36302636 | Potyvirus sorghitessellati | 3240613 | Viruses | Viruses | 62.1 | 4.83e-5 | NTclustered | gi|530550351|gb|KC985029.1| | 32619 | g1109675 | i0 | 97.222 | 11.5369774919614 | 36 | 1 | 12 | 0 | 65 | 100 | 110 | 75 | Sorghum mosaic virus isolate GZ-GT11 polyprotein gene, partial cds | blastn | 3588 | 62.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Patatavirales | Potyviridae | Potyvirus | Potyvirus sorghitessellati | ||
| 11718062 | 11718062 | PRJNA1120060_P_NODE_154310_length_503_cov_2.769767_g138423_i0 | PRJNA1120060 | 154310 | 503 | 2.769767 | 13.93192801 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 99 | 6.23e-16 | NTclustered | gi|2165836382|emb|OV196890.1| | 2697049 | g138423 | i0 | 91.667 | 2.19880715705765 | 72 | 5 | 14 | 1 | 430 | 500 | 121 | 50 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 1106 | 99 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11720750 | 11720750 | PRJNA1120060_P_NODE_1738450_length_283_cov_2.923810_g1720442_i0 | PRJNA1120060 | 1738450 | 283 | 2.92381 | 8.2743823 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 108 | 5.5e-19 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g1720442 | i0 | 94.366 | 0.434628975265018 | 71 | 3 | 25 | 1 | 4 | 73 | 151 | 221 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 123 | 108 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11725730 | 11725730 | PRJNA1120060_P_NODE_2107550_length_268_cov_3.379487_g2089506_i0 | PRJNA1120060 | 2107550 | 268 | 3.379487 | 9.05702516 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 119 | 2.39e-22 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g2089506 | i0 | 97.183 | 32.0970149253731 | 71 | 1 | 26 | 1 | 1 | 70 | 152 | 222 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8602 | 119 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 11731588 | 11731588 | PRJNA1120060_P_NODE_2552270_length_252_cov_2.083799_g2534195_i0 | PRJNA1120060 | 2552270 | 252 | 2.083799 | 5.25117348 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 8.05e-17 | NTclustered | gi|2165836382|emb|OV196890.1| | 2697049 | g2534195 | i0 | 92.857 | 31.3293650793651 | 70 | 4 | 27 | 1 | 180 | 248 | 117 | 48 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7895 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 13019241 | 13019241 | PRJNA1120060_P_NODE_403111_length_388_cov_2.571429_g385689_i0 | PRJNA1120060 | 403111 | 388 | 2.571429 | 9.97714452 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 91.6 | 7.849999999999999e-14 | NTclustered | gi|2165834141|emb|OV195847.1| | 2697049 | g385689 | i0 | 91.176 | 0.175257731958763 | 68 | 5 | 17 | 1 | 1 | 67 | 53 | 120 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 68 | 91.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 13023493 | 13023493 | PRJNA1120060_P_NODE_688871_length_335_cov_2.190840_g671058_i0 | PRJNA1120060 | 688871 | 335 | 2.19084 | 7.339314 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 104 | 8.6e-18 | NTclustered | gi|2165835030|emb|OV196298.1| | 2697049 | g671058 | i0 | 93.151 | 24.1253731343284 | 73 | 2 | 21 | 3 | 6 | 77 | 294 | 364 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8082 | 104 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 14280109 | 14280109 | PRJNA1120060_P_NODE_2406552_length_257_cov_2.250000_g2388484_i0 | PRJNA1120060 | 2406552 | 257 | 2.25 | 5.7825 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 8.23e-17 | NTclustered | gi|2165836382|emb|OV196890.1| | 2697049 | g2388484 | i0 | 92.857 | 4.33463035019455 | 70 | 4 | 27 | 1 | 189 | 257 | 119 | 50 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 1114 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 15546187 | 15546187 | PRJNA1120060_P_NODE_183093_length_480_cov_1.894349_g166814_i0 | PRJNA1120060 | 183093 | 480 | 1.894349 | 9.0928752 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 104 | 1.27e-17 | NTclustered | gi|2165836382|emb|OV196890.1| | 2697049 | g166814 | i0 | 93.056 | 17.63125 | 72 | 4 | 15 | 1 | 192 | 262 | 46 | 117 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8463 | 104 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 15551129 | 15551129 | PRJNA1120060_P_NODE_219133_length_457_cov_1.807292_g202515_i0 | PRJNA1120060 | 219133 | 457 | 1.807292 | 8.25932444 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 1.56e-16 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g202515 | i0 | 92.958 | 28.890590809628 | 71 | 2 | 15 | 3 | 389 | 457 | 221 | 152 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 13203 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 15551261 | 15551261 | PRJNA1120060_P_NODE_2201753_length_265_cov_1.322917_g2183701_i0 | PRJNA1120060 | 2201753 | 265 | 1.322917 | 3.50573005 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 93.5 | 1.43e-14 | NTclustered | gi|2165835426|emb|OV196492.1| | 2697049 | g2183701 | i0 | 91.429 | 4.14716981132075 | 70 | 3 | 26 | 3 | 14 | 82 | 71 | 138 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 1099 | 93.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 15552434 | 15552434 | PRJNA1120060_P_NODE_2292393_length_261_cov_3.127660_g2274334_i0 | PRJNA1120060 | 2292393 | 261 | 3.12766 | 8.1631926 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 8.38e-17 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g2274334 | i0 | 96.721 | 0.432950191570881 | 61 | 1 | 23 | 1 | 1 | 60 | 161 | 221 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 113 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 15554630 | 15554630 | PRJNA1120060_P_NODE_2458953_length_255_cov_2.675824_g2440883_i0 | PRJNA1120060 | 2458953 | 255 | 2.675824 | 6.8233512 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 8.16e-17 | NTclustered | gi|2165835426|emb|OV196492.1| | 2697049 | g2440883 | i0 | 92.958 | 34.0705882352941 | 71 | 2 | 27 | 3 | 183 | 251 | 138 | 69 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8688 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 16827679 | 16827679 | PRJNA1120060_P_NODE_2359054_length_259_cov_1.489247_g2340993_i0 | PRJNA1120060 | 2359054 | 259 | 1.489247 | 3.85714973 | Alphacoronavirus porci | 3433789 | Viruses | Viruses | 52.8 | 0.024 | NTclustered | gi|2426339587|gb|MW413556.1| | 28295 | g2340993 | i0 | 100 | 0.108108108108108 | 28 | 0 | 11 | 0 | 72 | 99 | 1737 | 1764 | Porcine epidemic diarrhea virus strain HB/HEBEU/2020, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Alphacoronavirus | Alphacoronavirus porci | ||
| 18121189 | 18121189 | PRJNA1120060_P_NODE_665095_length_338_cov_3.796226_g647304_i0 | PRJNA1120060 | 665095 | 338 | 3.796226 | 12.83124388 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 119 | 3.1e-22 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g647304 | i0 | 97.183 | 25.6745562130178 | 71 | 1 | 21 | 1 | 3 | 72 | 152 | 222 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8678 | 119 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 19361573 | 19361573 | PRJNA1120060_P_NODE_1283036_length_308_cov_2.114894_g1265091_i0 | PRJNA1120060 | 1283036 | 308 | 2.114894 | 6.51387352 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 1.01e-16 | NTclustered | gi|2165836382|emb|OV196890.1| | 2697049 | g1265091 | i0 | 92.857 | 26.3474025974026 | 70 | 4 | 22 | 1 | 240 | 308 | 117 | 48 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 8115 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 19366226 | 19366226 | PRJNA1120060_P_NODE_1605176_length_289_cov_1.328704_g1587183_i0 | PRJNA1120060 | 1605176 | 289 | 1.328704 | 3.83995456 | Cripavirus sp. | 1955141 | Viruses | Viruses | 52.8 | 0.027 | NTclustered | gi|2609773950|gb|OR597291.1| | 1955141 | g1587183 | i0 | 96.875 | 0.110726643598616 | 32 | 0 | 11 | 1 | 230 | 261 | 8512 | 8482 | Cripavirus sp. isolate BQCV_ARG_ER308, complete genome | blastn | 32 | 52.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Dicistroviridae | Cripavirus | Cripavirus sp. | ||
| 19390470 | 19390470 | PRJNA1120060_P_NODE_3598796_length_199_cov_4.388889_g3580668_i0 | PRJNA1120060 | 3598796 | 199 | 4.388889 | 8.73388911 | Porcine picobirnavirus | 442302 | Viruses | Viruses | 54.7 | 0.005 | NTclustered | gi|2095880040|gb|MW977915.1| | 442302 | g3580668 | i0 | 100 | 0.14572864321608 | 29 | 0 | 15 | 0 | 155 | 183 | 714 | 742 | MAG: Porcine picobirnavirus isolate 15211_NODE_197_len_2305_cov_151.272444 hypothetical protein and capsid protein-like gene, partial sequence | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Picobirnaviridae | Orthopicobirnavirus | Porcine picobirnavirus | ||
| 19394971 | 19394971 | PRJNA1120060_P_NODE_641856_length_342_cov_1.736059_g624091_i0 | PRJNA1120060 | 641856 | 342 | 1.736059 | 5.93732178 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 93.5 | 1.9e-14 | NTclustered | gi|2165834592|emb|OV196099.1| | 2697049 | g624091 | i0 | 92.424 | 0.274853801169591 | 66 | 4 | 19 | 1 | 1 | 65 | 50 | 115 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 94 | 93.5 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 19400022 | 19400022 | PRJNA1120060_P_NODE_98036_length_573_cov_3.860000_g83663_i0 | PRJNA1120060 | 98036 | 573 | 3.86 | 22.1178 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 69.4 | 5.61e-7 | NTclustered | gi|2165834303|emb|OV196009.1| | 2697049 | g83663 | i0 | 91.837 | 0.171029668411867 | 49 | 4 | 9 | 0 | 1 | 49 | 67 | 115 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 98 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 20637922 | 20637922 | PRJNA1120060_P_NODE_1360477_length_300_cov_3.339207_g1342504_i0 | PRJNA1120060 | 1360477 | 300 | 3.339207 | 10.017621 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 86.1 | 2.75e-12 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g1342504 | i0 | 96.226 | 0.35 | 53 | 1 | 17 | 1 | 1 | 52 | 169 | 221 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 105 | 86.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 20650158 | 20650158 | PRJNA1120060_P_NODE_224377_length_454_cov_2.160105_g207722_i0 | PRJNA1120060 | 224377 | 454 | 2.160105 | 9.8068767 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 97.1 | 2e-15 | NTclustered | gi|2165834592|emb|OV196099.1| | 2697049 | g207722 | i0 | 91.549 | 0.585903083700441 | 71 | 5 | 16 | 1 | 222 | 292 | 115 | 46 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 266 | 97.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 21925203 | 21925203 | PRJNA1120060_P_NODE_2204578_length_265_cov_1.026042_g2186526_i0 | PRJNA1120060 | 2204578 | 265 | 1.026042 | 2.7190113 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 91.6 | 5.13e-14 | NTclustered | gi|2165836382|emb|OV196890.1| | 2697049 | g2186526 | i0 | 91.176 | 1.67547169811321 | 68 | 4 | 25 | 1 | 200 | 265 | 118 | 51 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 444 | 91.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 23185908 | 23185908 | PRJNA1120060_P_NODE_1155599_length_311_cov_2.281513_g1137664_i0 | PRJNA1120060 | 1155599 | 311 | 2.281513 | 7.09550543 | Fish-associated picorna-like virus 4 | 3003960 | Viruses | Viruses | 54.7 | 0.008 | NTclustered | gi|2416706445|gb|OP933694.1| | 3003960 | g1137664 | i0 | 100 | 0.0932475884244373 | 29 | 0 | 9 | 0 | 260 | 288 | 7122 | 7150 | MAG: Fish-associated picorna-like virus 4 isolate fi102pic genomic sequence | blastn | 29 | 54.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 4 | ||||
| 23192620 | 23192620 | PRJNA1120060_P_NODE_1609579_length_289_cov_0.939815_g1591586_i0 | PRJNA1120060 | 1609579 | 289 | 0.939815 | 2.71606535 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 95.3 | 4.38e-15 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g1591586 | i0 | 92.537 | 0.328719723183391 | 67 | 4 | 23 | 1 | 1 | 66 | 156 | 222 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 95 | 95.3 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 23195825 | 23195825 | PRJNA1120060_P_NODE_1837659_length_279_cov_2.441748_g1819644_i0 | PRJNA1120060 | 1837659 | 279 | 2.441748 | 6.81247692 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 106 | 1.94e-18 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g1819644 | i0 | 95.522 | 0.440860215053763 | 67 | 2 | 25 | 1 | 214 | 279 | 222 | 156 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 123 | 106 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 23209052 | 23209052 | PRJNA1120060_P_NODE_2870379_length_244_cov_2.497076_g2852290_i0 | PRJNA1120060 | 2870379 | 244 | 2.497076 | 6.09286544 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 110 | 1.29e-19 | NTclustered | gi|2165835560|emb|OV196626.1| | 2697049 | g2852290 | i0 | 96.97 | 0.598360655737705 | 66 | 1 | 27 | 1 | 179 | 243 | 221 | 156 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 146 | 110 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 23217179 | 23217179 | PRJNA1120060_P_NODE_361959_length_399_cov_2.815951_g344648_i0 | PRJNA1120060 | 361959 | 399 | 2.815951 | 11.23564449 | Betacoronavirus pandemicum | 3418604 | Viruses | Viruses | 100 | 1.35e-16 | NTclustered | gi|2165835030|emb|OV196298.1| | 2697049 | g344648 | i0 | 92.958 | 19.7669172932331 | 71 | 2 | 17 | 3 | 166 | 234 | 295 | 364 | Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 | blastn | 7887 | 100 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 24474991 | 24474991 | PRJNA1120060_P_NODE_2235140_length_263_cov_4.289474_g2217086_i0 | PRJNA1120060 | 2235140 | 263 | 4.289474 | 11.28131662 | Henan mamastrovirus 3 | 2920408 | Viruses | Viruses | 52.8 | 0.024 | NTclustered | gi|2203408158|gb|MW784093.1| | 2920408 | g2217086 | i0 | 96.875 | 0.121673003802281 | 32 | 0 | 12 | 1 | 16 | 47 | 6175 | 6205 | MAG: Henan mamastrovirus 3 isolate 288-122863, complete genome | blastn | 32 | 52.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Stelpaviricetes | Stellavirales | Astroviridae | Mamastrovirus | Henan mamastrovirus 3 | ||
| 24476285 | 24476285 | PRJNA1120060_P_NODE_2333800_length_260_cov_1.368984_g2315740_i0 | PRJNA1120060 | 2333800 | 260 | 1.368984 | 3.5593584 | Pinus sylvestris partitivirus NL-2005 | 328694 | Viruses | Viruses | 78.7 | 3.91e-10 | NTclustered | gi|66476364|gb|AY973825.1| | 328694 | g2315740 | i0 | 90 | 0.230769230769231 | 60 | 6 | 23 | 0 | 1 | 60 | 35 | 94 | Pinus sylvestris partitivirus NL-2005 putative RNA-dependent RNA polymerase gene, partial cds | blastn | 60 | 78.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | Pinus sylvestris partitivirus NL-2005 | |||
| 27447678 | 27447678 | PRJNA1120060_P_NODE_1261443_length_309_cov_2.084746_g1243502_i0 | PRJNA1120060 | 1261443 | 309 | 2.084746 | 6.44186514 | Pinus albicaulis amalgavirus 1 | 2982067 | Viruses | Viruses | 56.6 | 1.13e-6 | NR | DAZ91039.1 | 2982067 | g1243502 | i0 | 37.8 | 0.796116504854369 | 82 | 37 | 66 | 1 | 103 | 306 | 868 | 949 | DAZ91039.1 TPA_asm: fusion protein [Pinus albicaulis amalgavirus 1] | diamond | 246 | 56.6 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Amalgaviridae | Amalgavirus | Pinus albicaulis amalgavirus 1 | ||
| 28773766 | 28773766 | PRJNA1120060_P_NODE_1767007_length_282_cov_2.143541_g1748996_i0 | PRJNA1120060 | 1767007 | 282 | 2.143541 | 6.04478562 | Pinus patula amalgavirus 1 | 2058877 | Viruses | Viruses | 120 | 3.21e-30 | NR | DAB41736.1 | 2058877 | g1748996 | i0 | 61.4 | 0.936170212765957 | 88 | 34 | 93.6 | 0 | 282 | 19 | 212 | 299 | DAB41736.1 TPA_exp: ORF1p, partial [Pinus patula amalgavirus 1] | diamond | 264 | 120 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Amalgaviridae | Pinus patula amalgavirus 1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;