RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1120060" and tax_phylum = "Foraminifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32281778 32281778 PRJNA1120060_P_NODE_1733199_length_283_cov_4.757143_g1715191_i0 PRJNA1120060 1733199 283 4.757143 13.46271469 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 52.4 2.44e-5   NR ETO24662.1 46433 g1715191 i0 40.9 0.69964664310954106 66 37 70 1 199 2 476 539 ETO24662.1 hypothetical protein RFI_12495 [Reticulomyxa filosa] diamond 198 52.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32619842 32619842 PRJNA1120060_P_NODE_1491860_length_294_cov_0.932127_g1473873_i0 PRJNA1120060 1491860 294 0.932127 2.74045338 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 55.1 3.17e-6   NR ETO24662.1 46433 g1473873 i0 50 7.73469387755102 52 26 53.1 0 139 294 469 520 ETO24662.1 hypothetical protein RFI_12495 [Reticulomyxa filosa] diamond 2274 55.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;