contig_metadata
12 rows where bioproject = "PRJNA1120060" and tax_phylum = "Fibrobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9202186 | 9202186 | PRJNA1120060_P_NODE_986568_length_312_cov_2.707113_g968639_i0 | PRJNA1120060 | 986568 | 312 | 2.707113 | 8.44619256 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|1958056460|gb|CP064986.1| | 2052160 | g968639 | i0 | 100 | 0.0897435897435897 | 28 | 0 | 9 | 0 | 96 | 123 | 191355 | 191382 | Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 19380764 | 19380764 | PRJNA1120060_P_NODE_2706556_length_248_cov_2.234286_g2688473_i0 | PRJNA1120060 | 2706556 | 248 | 2.234286 | 5.54102928 | uncultured Fibrobacteria bacterium | 1758207 | Bacteria | Bacteria | 104 | 6.11e-18 | NTclustered | gi|2874253984|emb|OY970309.1| | 1758207 | g2688473 | i0 | 88.372 | 0.346774193548387 | 86 | 10 | 35 | 0 | 143 | 228 | 1225841 | 1225756 | MAG: uncultured Fibrobacteria bacterium isolate MFD05502.bin.1.3 genome assembly, chromosome: 1 | blastn | 86 | 104 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | uncultured Fibrobacteria bacterium | ||||
| 27764832 | 27764832 | PRJNA1120060_P_NODE_3437424_length_212_cov_6.748201_g3419299_i0 | PRJNA1120060 | 3437424 | 212 | 6.748201 | 14.30618612 | Fibrobacteria bacterium | 2725311 | Bacteria | Bacteria | 42 | 0.047 | NR | MCB9497172.1 | 2725311 | g3419299 | i0 | 30.1 | 1.03301886792453 | 73 | 45 | 94.8 | 2 | 208 | 8 | 489 | 561 | MCB9497172.1 endo-1,4-beta-xylanase [Fibrobacteria bacterium] | diamond | 219 | 42 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacteria bacterium | ||||
| 27984483 | 27984483 | PRJNA1120060_P_NODE_1744545_length_283_cov_1.957143_g1726537_i0 | PRJNA1120060 | 1744545 | 283 | 1.957143 | 5.53871469 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 48.1 | 7.91e-4 | NR | MDB5050490.1 | 2052160 | g1726537 | i0 | 41.3 | 0.667844522968198 | 63 | 36 | 66.8 | 1 | 226 | 38 | 14 | 75 | MDB5050490.1 Ig domain protein group 1 domain protein [Fibrobacterota bacterium] | diamond | 189 | 48.1 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 29184534 | 29184534 | PRJNA1120060_P_NODE_1757089_length_282_cov_4.679426_g1739078_i0 | PRJNA1120060 | 1757089 | 282 | 4.679426 | 13.19598132 | Fibrobacteraceae bacterium | 2652288 | Bacteria | Bacteria | 43.5 | 0.0314 | NR | HSQ42780.1 | 2652288 | g1739078 | i0 | 32.4 | 0.787234042553192 | 74 | 43 | 71.3 | 2 | 240 | 40 | 5 | 78 | HSQ42780.1 hypothetical protein [Fibrobacteraceae bacterium] | diamond | 222 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacteraceae bacterium | ||
| 29720729 | 29720729 | PRJNA1120060_P_NODE_1553630_length_291_cov_1.697248_g1535639_i0 | PRJNA1120060 | 1553630 | 291 | 1.697248 | 4.93899168 | Fibrobacter succinogenes | 833 | Bacteria | Bacteria | 40.8 | 0.0466 | NR | WP_205428155.1 | 833 | g1535639 | i0 | 35.8 | 0.54639175257732 | 53 | 30 | 50.5 | 2 | 133 | 279 | 19 | 71 | WP_205428155.1 hypothetical protein, partial [Fibrobacter succinogenes] | diamond | 159 | 40.8 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter succinogenes | |
| 29880269 | 29880269 | PRJNA1120060_P_NODE_3369611_length_219_cov_5.671233_g3351493_i0 | PRJNA1120060 | 3369611 | 219 | 5.671233 | 12.42000027 | Fibrobacter sp. | 35828 | Bacteria | Bacteria | 42.7 | 0.0274 | NR | NLG39608.1 | 35828 | g3351493 | i0 | 36.7 | 0.671232876712329 | 49 | 27 | 67.1 | 1 | 157 | 11 | 546 | 590 | NLG39608.1 hypothetical protein [Fibrobacter sp.] | diamond | 147 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacteraceae | Fibrobacter | Fibrobacter sp. | |
| 30291259 | 30291259 | PRJNA1120060_P_NODE_3551312_length_202_cov_7.968992_g3533185_i0 | PRJNA1120060 | 3551312 | 202 | 7.968992 | 16.09736384 | Fibrobacterota bacterium | 2052160 | Bacteria | Bacteria | 41.6 | 0.0296 | NR | HAJ80152.1 | 2052160 | g3533185 | i0 | 40.5 | 0.623762376237624 | 42 | 25 | 62.4 | 0 | 30 | 155 | 97 | 138 | HAJ80152.1 hypothetical protein [Fibrobacterota bacterium] | diamond | 126 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacterota bacterium | |||||
| 31048091 | 31048091 | PRJNA1120060_P_NODE_1448935_length_296_cov_1.049327_g1430951_i0 | PRJNA1120060 | 1448935 | 296 | 1.049327 | 3.10600792 | Chitinivibrionales bacterium | 2663014 | Bacteria | Bacteria | 47.4 | 0.00153 | NR | MBN1981350.1 | 2663014 | g1430951 | i0 | 33.7 | 0.902027027027027 | 89 | 53 | 84.1 | 1 | 256 | 8 | 11 | 99 | MBN1981350.1 hypothetical protein [Chitinivibrionales bacterium] | diamond | 267 | 47.4 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinivibrionia | Chitinivibrionales | Chitinivibrionales bacterium | |||
| 31428782 | 31428782 | PRJNA1120060_P_NODE_872556_length_313_cov_2.345833_g854632_i0 | PRJNA1120060 | 872556 | 313 | 2.345833 | 7.34245729 | Fibrobacteres bacterium CG2_3 | 1805149 | Bacteria | Bacteria | 46.6 | 0.00371 | NR | OIP51258.1 | 1805149 | g854632 | i0 | 46.2 | 0.373801916932907 | 39 | 21 | 37.4 | 0 | 200 | 84 | 561 | 599 | OIP51258.1 MAG: hypothetical protein AUK31_04450 [Fibrobacteres bacterium CG2_30_45_31] | diamond | 117 | 46.6 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteres bacterium CG2_30_45_31 | |||||
| 31680004 | 31680004 | PRJNA1120060_P_NODE_1307957_length_306_cov_2.021459_g1290005_i0 | PRJNA1120060 | 1307957 | 306 | 2.021459 | 6.18566454 | Chitinivibrionales bacterium | 2663014 | Bacteria | Bacteria | 43.9 | 0.0295 | NR | MDD5673408.1 | 2663014 | g1290005 | i0 | 35.9 | 0.627450980392157 | 64 | 33 | 57.8 | 3 | 67 | 243 | 48 | 108 | MDD5673408.1 glycosyltransferase family 87 protein [Chitinivibrionales bacterium] | diamond | 192 | 43.9 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Chitinivibrionia | Chitinivibrionales | Chitinivibrionales bacterium | |||
| 32503335 | 32503335 | PRJNA1120060_P_NODE_1882559_length_277_cov_3.294118_g1864540_i0 | PRJNA1120060 | 1882559 | 277 | 3.294118 | 9.12470686 | Fibrobacterales bacterium | 2478481 | Bacteria | Bacteria | 43.5 | 0.0269 | NR | GHV13833.1 | 2478481 | g1864540 | i0 | 40 | 0.487364620938628 | 45 | 27 | 48.7 | 0 | 273 | 139 | 191 | 235 | GHV13833.1 hypothetical protein AGMMS49938_08970 [Fibrobacterales bacterium] | diamond | 135 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Fibrobacterota | Fibrobacteria | Fibrobacterales | Fibrobacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;