RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1120060", tax_phylum = "Cressdnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 7 ✖

tax_phylum 1

  • Cressdnaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120060 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1542355 1542355 PRJNA1120060_P_NODE_552982_length_356_cov_4.424028_g535304_i0 PRJNA1120060 552982 356 4.424028 15.74953968 Grapevine geminivirus A defective DNA 1928761 Viruses Viruses 56.5 0.003   NTclustered gi|1898523535|gb|MT344724.1| 1928761 g535304 i0 100 0.168539325842697 30 0 8 0 90 119 1307 1278 Grapevine geminivirus A defective DNA isolate def2019YM4, complete genome blastn 60 56.5 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Geminiviridae   Grapevine geminivirus A defective DNA
5360578 5360578 PRJNA1120060_P_NODE_2936965_length_243_cov_0.905882_g2918872_i0 PRJNA1120060 2936965 243 0.905882 2.20129326 Ficedula mugimaki CRESS-DNA-virus sp. 2815035 Viruses Viruses 58.4 4.71e-4   NTclustered gi|2015371934|gb|MW182753.1| 2815035 g2918872 i0 94.737 0.156378600823045 38 1 16 1 25 62 2140 2104 MAG: Ficedula mugimaki CRESS-DNA-virus sp. isolate muf159cir1 genomic sequence blastn 38 58.4 1 Viruses   Shotokuvirae Cressdnaviricota         Ficedula mugimaki CRESS-DNA-virus sp.
10449520 10449520 PRJNA1120060_P_NODE_2024269_length_272_cov_1.020101_g2006236_i0 PRJNA1120060 2024269 272 1.020101 2.77467472 Grapevine geminivirus A defective DNA 1928761 Viruses Viruses 56.5 0.002   NTclustered gi|1898523535|gb|MT344724.1| 1928761 g2006236 i0 100 0.220588235294118 30 0 11 0 165 194 1278 1307 Grapevine geminivirus A defective DNA isolate def2019YM4, complete genome blastn 60 56.5 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Geminiviridae   Grapevine geminivirus A defective DNA
23183659 23183659 PRJNA1120060_P_NODE_1013599_length_312_cov_2.372385_g995670_i0 PRJNA1120060 1013599 312 2.372385 7.4018412 Galvornvirus isengard 2955925 Viruses Viruses 52.8 0.029   NTclustered gi|2302020959|gb|MT208456.1| 1954248 g995670 i0 94.286 0.112179487179487 35 1 11 1 38 71 3520 3486 MAG: Circoviridae sp. isolate CN13_L19_588, complete genome blastn 35 52.8 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
23205309 23205309 PRJNA1120060_P_NODE_2542159_length_252_cov_3.525140_g2524084_i0 PRJNA1120060 2542159 252 3.52514 8.8833528 Galvornvirus isengard 2955925 Viruses Viruses 54.7 0.006   NTclustered gi|2302017528|gb|MT205156.1| 1954248 g2524084 i0 90.476 0.166666666666667 42 2 16 2 45 85 1856 1816 MAG: Circoviridae sp. isolate CN3_L16_2910, complete genome blastn 42 54.7 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
23220708 23220708 PRJNA1120060_P_NODE_586599_length_351_cov_1.179856_g568888_i0 PRJNA1120060 586599 351 1.179856 4.14129456 Galvornvirus isengard 2955925 Viruses Viruses 52.8 0.033   NTclustered gi|2302008998|gb|MT202264.1| 1954248 g568888 i0 100 0.0797720797720798 28 0 8 0 134 161 1191 1218 MAG: Circoviridae sp. isolate CN3_L15_2942, complete genome blastn 28 52.8 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Rohanvirales Nenyaviridae Galvornvirus Galvornvirus isengard
29122586 29122586 PRJNA1120060_P_NODE_3484949_length_208_cov_5.022222_g3466823_i0 PRJNA1120060 3484949 208 5.022222 10.44622176 Zebra finch circovirus 1642515 Viruses Viruses 42.4 0.0163   NR YP_009134742.1 1642515 g3466823 i0 37.1 0.894230769230769 62 35 83.7 2 2 175 4 65 YP_009134742.1 ORFC2 [Zebra finch circovirus] diamond 186 42.4 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae Circovirus Circovirus zebrafinch

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;