RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Woeseibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13006552 13006552 PRJNA1120060_P_NODE_2541671_length_252_cov_3.636872_g2523596_i0 PRJNA1120060 2541671 252 3.636872 9.16491744 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 52.8 0.023   NTclustered gi|1950815156|gb|CP066686.1| 2026804 g2523596 i0 100 0.111111111111111 28 0 11 0 190 217 706535 706562 MAG: Candidatus Woesebacteria bacterium isolate NC_groundwater_442_Ag_B-0.1um_40_41 chromosome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
26742199 26742199 PRJNA1120060_P_NODE_158701_length_499_cov_2.826291_g142725_i0 PRJNA1120060 158701 499 2.826291 14.10319209 Bacteria 2 Bacteria Bacteria 46.6 0.0108   NR KKP73695.1 1618596 g142725 i0 32.5 0.961923847695391 80 44 45.7 2 433 206 111 184 KKP73695.1 MAG: LAGLIDADG homing endonuclease [Candidatus Woesebacteria bacterium GW2011_GWE1_35_20] diamond 480 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWE1_35_20
29310397 29310397 PRJNA1120060_P_NODE_1460689_length_295_cov_3.063063_g1442704_i0 PRJNA1120060 1460689 295 3.063063 9.03603585 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 42.7 0.0342   NR MCA9371859.1 2026804 g1442704 i0 24.6 0.661016949152542 65 47 64.1 1 294 106 49 113 MCA9371859.1 GNAT family N-acetyltransferase [Candidatus Woesebacteria bacterium] diamond 195 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
32187157 32187157 PRJNA1120060_P_NODE_2499158_length_254_cov_1.370166_g2481087_i0 PRJNA1120060 2499158 254 1.370166 3.48022164 Candidatus Woesebacteria bacterium RIFCSPHIGHO2_ 2026804 Bacteria Bacteria 42 0.037   NR OGM19844.1 1802490 g2481087 i0 43.6 0.460629921259843 39 22 46.1 0 3 119 102 140 OGM19844.1 MAG: hypothetical protein A2686_01275 [Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_10] diamond 117 42 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RIFCSPHIGHO2_01_FULL_38_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;