RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1120060 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29058061 29058061 PRJNA1120060_P_NODE_1583308_length_290_cov_1.129032_g1565316_i0 PRJNA1120060 1583308 290 1.129032 3.2741928 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 44.3 0.00665   NR MFA5839848.1 2053573 g1565316 i0 40.4 0.589655172413793 57 34 59 0 1 171 72 128 MFA5839848.1 ribonuclease HI family protein [Candidatus Margulisiibacteriota bacterium] diamond 171 44.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
31354980 31354980 PRJNA1120060_P_NODE_402076_length_388_cov_3.400000_g384654_i0 PRJNA1120060 402076 388 3.4 13.192 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 79 8.02e-16   NR MFA5839848.1 2053573 g384654 i0 41.1 2.30412371134021 112 66 86.6 0 1 336 18 129 MFA5839848.1 ribonuclease HI family protein [Candidatus Margulisiibacteriota bacterium] diamond 894 79.3 0.996216897856242 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium
31681247 31681247 PRJNA1120060_P_NODE_3205217_length_231_cov_3.000000_g3187110_i0 PRJNA1120060 3205217 231 3 6.93 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 42.7 0.0316   NR MFC1482641.1 2053573 g3187110 i0 35.3 0.662337662337662 51 32 66.2 1 194 42 18 67 MFC1482641.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 153 42.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;