RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1120060" and tax_phylum = "Candidatus Delongiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Delongiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27606715 27606715 PRJNA1120060_P_NODE_3093004_length_236_cov_3.601227_g3074903_i0 PRJNA1120060 3093004 236 3.601227 8.49889572 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 42.4 0.0462   NR MCK5760914.1 2044594 g3074903 i0 31.3 1.23305084745763 64 40 76.3 1 233 54 376 439 MCK5760914.1 glutamine--tRNA ligase/YqeY domain fusion protein [Candidatus Delongbacteria bacterium] diamond 291 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
28301401 28301401 PRJNA1120060_P_NODE_3611946_length_198_cov_4.456000_g3593818_i0 PRJNA1120060 3611946 198 4.456 8.82288 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 43.9 0.00799   NR MDA3884197.1 2044594 g3593818 i0 34.6 0.787878787878788 52 34 78.8 0 195 40 50 101 MDA3884197.1 hypothetical protein [Candidatus Delongbacteria bacterium] diamond 156 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
32440783 32440783 PRJNA1120060_P_NODE_2839839_length_245_cov_1.465116_g2821753_i0 PRJNA1120060 2839839 245 1.465116 3.5895342 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 106 7.7e-26   NR MCG2760594.1 2044594 g2821753 i0 64.9 0.942857142857143 77 27 94.3 0 239 9 202 278 MCG2760594.1 WG repeat-containing protein [Candidatus Delongbacteria bacterium] diamond 231 106 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;