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contig_metadata

17 rows where bioproject = "PRJNA1120060", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 17 ✖

tax_kingdom 1

  • Shotokuvirae · 17 ✖

bioproject 1

  • PRJNA1120060 · 17 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2818481 2818481 PRJNA1120060_P_NODE_553543_length_356_cov_3.787986_g535865_i0 PRJNA1120060 553543 356 3.787986 13.48523016 Human papillomavirus 10566 Viruses Viruses 636 7.31e-178   NTclustered gi|1559669430|gb|MH777268.2| 10566 g535865 i0 98.876 1.13483146067416 356 4 100 0 1 356 6912 6557 MAG: Human papillomavirus isolate HPV-mSK_126, complete genome blastn 404 636 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
4070392 4070392 PRJNA1120060_P_NODE_1830444_length_279_cov_4.116505_g1812429_i0 PRJNA1120060 1830444 279 4.116505 11.48504895 Alphapapillomavirus 7 337042 Viruses Viruses 52.8 0.026   NTclustered gi|1206430579|gb|KY565612.1| 10593 g1812429 i0 100 0.100358422939068 28 0 10 0 7 34 728 701 Human papillomavirus 45 isolate 509_RJ E6 gene, complete cds; and E7 gene, partial cds blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 7
5338339 5338339 PRJNA1120060_P_NODE_1250925_length_309_cov_2.919492_g1232984_i0 PRJNA1120060 1250925 309 2.919492 9.02123028 Alphapapillomavirus 3 333767 Viruses Viruses 52.8 0.029   NTclustered gi|289656451|gb|GQ244463.1| 735496 g1232984 i0 100 0.0906148867313916 28 0 9 0 185 212 2574 2547 Human papillomavirus type 114, complete genome blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 3
5363901 5363901 PRJNA1120060_P_NODE_3224625_length_230_cov_3.382166_g3206518_i0 PRJNA1120060 3224625 230 3.382166 7.7789818 Human papillomavirus 10566 Viruses Viruses 420 4.89e-113   NTclustered gi|1559669430|gb|MH777268.2| 10566 g3206518 i0 99.565 1.9304347826087 230 1 100 0 1 230 3542 3313 MAG: Human papillomavirus isolate HPV-mSK_126, complete genome blastn 444 420 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
6620097 6620097 PRJNA1120060_P_NODE_1740226_length_283_cov_2.600000_g1722218_i0 PRJNA1120060 1740226 283 2.6 7.358 Human papillomavirus 10566 Viruses Viruses 363 1.0599999999999999e-95   NTclustered gi|1559669430|gb|MH777268.2| 10566 g1722218 i0 99.497 1 199 1 100 0 85 283 7149 6951 MAG: Human papillomavirus isolate HPV-mSK_126, complete genome blastn 283 363 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
6627610 6627610 PRJNA1120060_P_NODE_2299186_length_261_cov_2.138298_g2281127_i0 PRJNA1120060 2299186 261 2.138298 5.58095778 Gammapapillomavirus 11 1513256 Viruses Viruses 483 7.12e-132   NTclustered gi|389656408|ref|NC_017994.1| 1070409 g2281127 i0 100 1.98850574712644 261 0 100 0 1 261 649 909 Human papillomavirus type 136, complete genome blastn 519 483 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 11
7900993 7900993 PRJNA1120060_P_NODE_2179427_length_265_cov_9.145833_g2161375_i0 PRJNA1120060 2179427 265 9.145833 24.23645745 Human papillomavirus 10566 Viruses Viruses 479 9.38e-131   NTclustered gi|1559669430|gb|MH777268.2| 10566 g2161375 i0 99.245 1.88679245283019 265 2 100 0 1 265 6357 6093 MAG: Human papillomavirus isolate HPV-mSK_126, complete genome blastn 500 479 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
7923820 7923820 PRJNA1120060_P_NODE_767_length_8024_cov_41.330273_g202_i0 PRJNA1120060 767 8024 41.330273 3316.34110552 Dyothetapapillomavirus 1 1235662 Viruses Viruses 9058 0   NTclustered gi|1464308911|ref|NC_038520.1| 568209 g202 i0 99.878 3.14930209371884 4923 6 100 0 1 4923 4923 1 Feline papillomavirus type 2 isolate Main Coon 2007, complete genome blastn 25270 9058 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Dyothetapapillomavirus Dyothetapapillomavirus 1
9193942 9193942 PRJNA1120060_P_NODE_438128_length_379_cov_8.192810_g420631_i0 PRJNA1120060 438128 379 8.19281 31.0507499 Human papillomavirus 10566 Viruses Viruses 390 6.74e-104   NTclustered gi|1559669430|gb|MH777268.2| 10566 g420631 i0 99.078 0.965699208443272 217 2 97 0 2 218 4630 4846 MAG: Human papillomavirus isolate HPV-mSK_126, complete genome blastn 366 390 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
9197125 9197125 PRJNA1120060_P_NODE_64768_length_654_cov_5.759036_g52152_i0 PRJNA1120060 64768 654 5.759036 37.66409544 Human papillomavirus 10566 Viruses Viruses 1181 0   NTclustered gi|1559669430|gb|MH777268.2| 10566 g52152 i0 99.235 4.96483180428135 654 5 100 0 1 654 76 729 MAG: Human papillomavirus isolate HPV-mSK_126, complete genome blastn 3247 1181 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
13009653 13009653 PRJNA1120060_P_NODE_2817271_length_245_cov_4.860465_g2799185_i0 PRJNA1120060 2817271 245 4.860465 11.90813925 Melanogrammus aeglefinus-associated papillomavirus 1 2683333 Viruses Viruses 52.8 0.022   NTclustered gi|2069601150|gb|MH617143.2| 2683333 g2799185 i0 96.774 0.126530612244898 31 1 13 0 144 174 3161 3191 MAG: Melanogrammus aeglefinus-associated papillomavirus 1 isolate ctce22, complete genome blastn 31 52.8 1 Viruses non-mammal papillomaviruses Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Melanogrammus aeglefinus-associated papillomavirus 1
14260298 14260298 PRJNA1120060_P_NODE_1005072_length_312_cov_2.497908_g987143_i0 PRJNA1120060 1005072 312 2.497908 7.79347296 Human papillomavirus 10566 Viruses Viruses 279 1.23e-70   NTclustered gi|1144331739|gb|KX781283.1| 10566 g987143 i0 100 3.37820512820513 151 0 97 0 162 312 2906 2756 Human papillomavirus isolate Dysk4, complete genome blastn 1054 279 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
16829885 16829885 PRJNA1120060_P_NODE_2529174_length_253_cov_1.294444_g2511102_i0 PRJNA1120060 2529174 253 1.294444 3.27494332 Gammapapillomavirus 10 1175852 Viruses Viruses 468 1.92e-127   NTclustered gi|312451813|gb|GU117633.1| 909332 g2511102 i0 100 1.98418972332016 253 0 100 0 1 253 203 455 Human papillomavirus type 133, complete genome blastn 502 468 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 10
18110703 18110703 PRJNA1120060_P_NODE_3068375_length_237_cov_4.548780_g3050274_i0 PRJNA1120060 3068375 237 4.54878 10.7806086 Betapapillomavirus 2 333924 Viruses Viruses 394 3.069999999999999e-105   NTclustered gi|186461194|gb|EU410348.1| 518629 g3050274 i0 96.624 9.19409282700422 237 8 100 0 1 237 5771 5535 Human papillomavirus type 110, complete genome blastn 2179 394 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2
18115814 18115814 PRJNA1120060_P_NODE_3529095_length_204_cov_5.916031_g3510968_i0 PRJNA1120060 3529095 204 5.916031 12.06870324 Gammapapillomavirus 7 1175849 Viruses Viruses 324 3.42e-84   NTclustered gi|343411537|gb|HM999990.1| 1070411 g3510968 i0 95.98 2.63235294117647 199 8 98 0 1 199 3675 3873 Human papillomavirus type 138 isolate GH13, complete genome blastn 537 324 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 7
23193533 23193533 PRJNA1120060_P_NODE_1676379_length_286_cov_1.492958_g1658378_i0 PRJNA1120060 1676379 286 1.492958 4.26985988 Human papillomavirus 10566 Viruses Viruses 501 2.18e-137   NTclustered gi|1559669484|gb|MH777321.2| 10566 g1658378 i0 98.252 14.8251748251748 286 5 100 0 1 286 4458 4743 MAG: Human papillomavirus isolate HPV-mSK_179, complete genome blastn 4240 501 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
23196495 23196495 PRJNA1120060_P_NODE_1886839_length_277_cov_2.500000_g1868820_i0 PRJNA1120060 1886839 277 2.5 6.925 Human papillomavirus 10566 Viruses Viruses 507 4.53e-139   NTclustered gi|371486189|gb|JF966371.1| 10566 g1868820 i0 99.639 3 277 1 100 0 1 277 1386 1662 Human papillomavirus isolate 915 F 06 002 KN1, complete genome blastn 831 507 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;