RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120060", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27354252 27354252 PRJNA1120060_P_NODE_3273703_length_228_cov_2.864516_g3255595_i0 PRJNA1120060 3273703 228 2.864516 6.53109648 Rozella allomycis CSF55 988480 Fungi Fungi 43.1 0.0202   NR EPZ31849.1 988480 g3255595 i0 31.7 0.828947368421053 63 43 82.9 0 218 30 177 239 EPZ31849.1 hypothetical protein O9G_000328 [Rozella allomycis CSF55] diamond 189 43.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31712258 31712258 PRJNA1120060_P_NODE_2005177_length_272_cov_3.663317_g1987144_i0 PRJNA1120060 2005177 272 3.663317 9.96422224 Rozella allomycis CSF55 988480 Fungi Fungi 43.1 0.038   NR EPZ32879.1 988480 g1987144 i0 36.1 0.794117647058823 72 41 73.9 1 228 28 279 350 EPZ32879.1 FAD-binding 8 domain-containing protein [Rozella allomycis CSF55] diamond 216 43.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;