RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1120060" and tax_clade = "candidate division MSBL1"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • candidate division MSBL1 · 1 ✖

bioproject 1

  • PRJNA1120060 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32124243 32124243 PRJNA1120060_P_NODE_2765898_length_247_cov_0.890805_g2747814_i0 PRJNA1120060 2765898 247 0.890805 2.20028835 candidate division MSBL1 archaeon SCGC-AAA259J 215777 Archaea Archaea 43.5 0.0164   NR KXA98807.1 1698269 g2747814 i0 43.3 0.728744939271255 60 33 72.9 1 15 194 29 87 KXA98807.1 50S ribosomal protein L1 [candidate division MSBL1 archaeon SCGC-AAA259J03] diamond 180 43.5 1 Archaea candidate division MSBL1 Methanobacteriati Methanobacteriota         candidate division MSBL1 archaeon SCGC-AAA259J03

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;