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contig_metadata

18 rows where bioproject = "PRJNA1120060", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 18 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 18 ✖

bioproject 1

  • PRJNA1120060 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12504849 12504849 PRJNA1120060_P_NODE_2218610_length_264_cov_2.256545_g2200557_i0 PRJNA1120060 2218610 264 2.256545 5.9572788 Bacteria 2 Bacteria Bacteria 52.8 0.024   NTclustered gi|2126063867|gb|CP085689.1| 2886196 g2200557 i0 100 0.212121212121212 28 0 11 0 98 125 2265989 2265962 Lentisphaerae bacterium WC36 chromosome, complete genome blastn 56 52.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium WC36
20659012 20659012 PRJNA1120060_P_NODE_2974877_length_242_cov_0.923077_g2956783_i0 PRJNA1120060 2974877 242 0.923077 2.23384634 Lentisphaera profundi 1658616 Bacteria Bacteria 54.7 0.006   NTclustered gi|2445967839|gb|CP117812.1| 1658616 g2956783 i0 100 0.119834710743802 29 0 12 0 198 226 424716 424744 Lentisphaera profundi strain SAORIC-696 chromosome 2, complete sequence blastn 29 54.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae Lentisphaera Lentisphaera profundi
26679148 26679148 PRJNA1120060_P_NODE_2446581_length_256_cov_1.032787_g2428512_i0 PRJNA1120060 2446581 256 1.032787 2.64393472 Victivallis 172900 Bacteria Bacteria 129 5.59e-34   NR MFA4945509.1 2053569 g2428512 i0 65.5 2.90625 84 29 98.4 0 256 5 53 136 MFA4945509.1 branched-chain amino acid aminotransferase [Lentisphaeria bacterium] diamond 744 130 0.992307692307692 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27384972 27384972 PRJNA1120060_P_NODE_205343_length_465_cov_2.563776_g188837_i0 PRJNA1120060 205343 465 2.563776 11.9215584 Lentisphaerae bacterium RIFOXYA12_FULL_48_11 1798578 Bacteria Bacteria 42.7 0.0343   NR OGV64345.1 1798578 g188837 i0 39.3 0.361290322580645 56 34 36.1 0 417 250 13 68 OGV64345.1 MAG: hypothetical protein A2283_24110 [Lentisphaerae bacterium RIFOXYA12_FULL_48_11] diamond 168 42.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium RIFOXYA12_FULL_48_11
27764197 27764197 PRJNA1120060_P_NODE_2442984_length_256_cov_1.409836_g2424915_i0 PRJNA1120060 2442984 256 1.409836 3.60918016 Lentisphaerota bacterium 1932692 Bacteria Bacteria 42.7 0.0445   NR NLB65384.1 1932692 g2424915 i0 33 1.03125 88 37 82 4 38 247 269 352 NLB65384.1 hypothetical protein [Lentisphaerota bacterium] diamond 264 42.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
28173852 28173852 PRJNA1120060_P_NODE_1826126_length_280_cov_1.043478_g1808112_i0 PRJNA1120060 1826126 280 1.043478 2.9217384 Lentisphaera profundi 1658616 Bacteria Bacteria 41.2 0.0397   NR WDE96618.1 1658616 g1808112 i0 36 0.535714285714286 50 31 53.6 1 227 78 36 84 WDE96618.1 hypothetical protein PQO03_01375 [Lentisphaera profundi] diamond 150 41.2 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae Lentisphaera Lentisphaera profundi
28680495 28680495 PRJNA1120060_P_NODE_3613507_length_198_cov_4.200000_g3595379_i0 PRJNA1120060 3613507 198 4.2 8.316 Lentisphaera profundi 1658616 Bacteria Bacteria 42 0.0387   NR WP_274150939.1 1658616 g3595379 i0 31.7 0.954545454545455 63 42 95.5 1 1 189 210 271 WP_274150939.1 serine hydrolase [Lentisphaera profundi] diamond 189 42 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae Lentisphaera Lentisphaera profundi
29059263 29059263 PRJNA1120060_P_NODE_3442528_length_212_cov_4.604317_g3424403_i0 PRJNA1120060 3442528 212 4.604317 9.76115204 Lentisphaerota bacterium 1932692 Bacteria Bacteria 42 0.0465   NR NLB69628.1 1932692 g3424403 i0 36.6 0.580188679245283 41 26 58 0 212 90 269 309 NLB69628.1 formylglycine-generating enzyme family protein [Lentisphaerota bacterium] diamond 123 42 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
29531740 29531740 PRJNA1120060_P_NODE_1782430_length_281_cov_4.014423_g1764418_i0 PRJNA1120060 1782430 281 4.014423 11.28052863 Lentisphaeria bacterium 2053569 Bacteria Bacteria 43.5 0.0308   NR MBR4664273.1 2053569 g1764418 i0 27.5 0.97153024911032 91 62 95 3 279 13 61 149 MBR4664273.1 carbohydrate-binding protein [Lentisphaeria bacterium] diamond 273 43.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
29626509 29626509 PRJNA1120060_P_NODE_2562350_length_252_cov_1.268156_g2544275_i0 PRJNA1120060 2562350 252 1.268156 3.19575312 Lentisphaeria bacterium 2053569 Bacteria Bacteria 43.5 0.0222   NR MBO7327534.1 2053569 g2544275 i0 25.8 0.785714285714286 66 49 78.6 0 218 21 181 246 MBO7327534.1 hypothetical protein [Lentisphaeria bacterium] diamond 198 43.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
29626936 29626936 PRJNA1120060_P_NODE_3256670_length_229_cov_2.243590_g3238563_i0 PRJNA1120060 3256670 229 2.24359 5.1378211 Victivallis vadensis 172901 Bacteria Bacteria 42.4 0.0413   NR WP_302453179.1 172901 g3238563 i0 40.4 0.681222707423581 52 29 68.1 1 50 205 18 67 WP_302453179.1 hypothetical protein [Victivallis vadensis] diamond 156 42.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
30038056 30038056 PRJNA1120060_P_NODE_3346311_length_222_cov_4.248322_g3328197_i0 PRJNA1120060 3346311 222 4.248322 9.43127484 Lentisphaeria bacterium 2053569 Bacteria Bacteria 42.7 0.0279   NR MBR4662836.1 2053569 g3328197 i0 42.9 0.567567567567568 42 23 56.8 1 33 158 175 215 MBR4662836.1 DUF2339 domain-containing protein [Lentisphaeria bacterium] diamond 126 42.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31079976 31079976 PRJNA1120060_P_NODE_2071075_length_270_cov_1.360406_g2053038_i0 PRJNA1120060 2071075 270 1.360406 3.6730962 Lentisphaeraceae bacterium 2461380 Bacteria Bacteria 45.1 0.00702   NR MCM8537095.1 2461380 g2053038 i0 31 0.933333333333333 84 49 84.4 3 32 259 52 134 MCM8537095.1 glutamate--tRNA ligase family protein [Lentisphaeraceae bacterium] diamond 252 45.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae   Lentisphaeraceae bacterium
31554707 31554707 PRJNA1120060_P_NODE_2608676_length_251_cov_0.865169_g2590599_i0 PRJNA1120060 2608676 251 0.865169 2.17157419 Victivallis lenta 2606640 Bacteria Bacteria 44.7 0.00854   NR WP_154416726.1 2606640 g2590599 i0 38.9 0.645418326693227 54 33 64.5 0 21 182 282 335 WP_154416726.1 S1 family peptidase [Victivallis lenta] diamond 162 44.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis lenta
31870256 31870256 PRJNA1120060_P_NODE_1895717_length_277_cov_1.382353_g1877698_i0 PRJNA1120060 1895717 277 1.382353 3.82911781 Lentisphaeria bacterium 2053569 Bacteria Bacteria 43.5 0.0294   NR MBQ6598830.1 2053569 g1877698 i0 46.9 0.346570397111913 32 17 34.7 0 90 185 226 257 MBQ6598830.1 hypothetical protein [Lentisphaeria bacterium] diamond 96 43.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32408843 32408843 PRJNA1120060_P_NODE_2729079_length_248_cov_0.880000_g2710996_i0 PRJNA1120060 2729079 248 0.88 2.1824 Lentisphaeria bacterium 2053569 Bacteria Bacteria 44.7 0.00839   NR MBP5181936.1 2053569 g2710996 i0 50 0.338709677419355 28 14 33.9 0 92 9 330 357 MBP5181936.1 endopeptidase La [Lentisphaeria bacterium] diamond 84 44.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32629090 32629090 PRJNA1120060_P_NODE_1750420_length_283_cov_1.314286_g1732412_i0 PRJNA1120060 1750420 283 1.314286 3.71942938 Lentisphaerales bacterium 2448604 Bacteria Bacteria 43.5 0.0312   NR TFH16640.1 2448604 g1732412 i0 38.9 0.763250883392226 72 41 73.1 1 14 220 305 376 TFH16640.1 MAG: MiaB/RimO family radical SAM methylthiotransferase [Lentisphaerales bacterium] diamond 216 43.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales     Lentisphaerales bacterium
32714450 32714450 PRJNA1120060_P_NODE_3394780_length_216_cov_12.902098_g3376660_i0 PRJNA1120060 3394780 216 12.902098 27.86853168 Lentisphaerota 256845 Bacteria Bacteria 42.7 0.0265   NR WP_307262527.1 760260 g3376660 i0 38.2 1.52777777777778 55 34 76.4 0 205 41 917 971 WP_307262527.1 serine/threonine protein kinase [Oligosphaera ethanolica] diamond 330 42.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Oligosphaeria Oligosphaerales Oligosphaeraceae Oligosphaera Oligosphaera ethanolica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;