RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1120060", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woykeibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woykeibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1120060 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29278834 29278834 PRJNA1120060_P_NODE_1593749_length_289_cov_2.787037_g1575756_i0 PRJNA1120060 1593749 289 2.787037 8.05453693 Candidatus Woykebacteria bacterium RBG_16_43_9 1802596 Bacteria Bacteria 49.7 7e-5   NR OGY25547.1 1802596 g1575756 i0 35.9 0.664359861591695 64 41 66.4 0 287 96 78 141 OGY25547.1 MAG: hypothetical protein A2Z11_03930 [Candidatus Woykebacteria bacterium RBG_16_43_9] diamond 192 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Woykeibacteriota         Candidatus Woykebacteria bacterium RBG_16_43_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;