RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1120060", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Amesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Amesiibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1120060 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26720846 26720846 PRJNA1120060_P_NODE_3063641_length_238_cov_2.012121_g3045540_i0 PRJNA1120060 3063641 238 2.012121 4.78884798 Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23 1797263 Bacteria Bacteria 43.5 0.00828   NR OGD08785.1 1797263 g3045540 i0 33.3 0.680672268907563 54 36 68.1 0 228 67 6 59 OGD08785.1 MAG: hypothetical protein A2397_05175 [Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23] diamond 162 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23
31259866 31259866 PRJNA1120060_P_NODE_1804155_length_280_cov_5.647343_g1786141_i0 PRJNA1120060 1804155 280 5.647343 15.8125604 Bacteria 2 Bacteria Bacteria 85.9 2.03e-17   NR KKU99915.1 1618355 g1786141 i0 63.2 17.5071428571429 68 24 71.8 1 205 5 3 70 KKU99915.1 MAG: AAA ATPase, partial [Candidatus Amesbacteria bacterium GW2011_GWA1_48_9] diamond 4902 85.9 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium GW2011_GWA1_48_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;