RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1118794", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1118794 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1024927 1024927 PRJNA1118794_P_NODE_44041_length_260_cov_1.406417_g43291_i0 PRJNA1118794 44041 260 1.406417 3.6566842 Orthorubulavirus 2560195 Viruses Viruses 481 2.55e-131   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g43291 i0 100 68.2692307692308 260 0 100 0 1 260 4160 4419 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 17750 481 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
1505548 1505548 PRJNA1118794_P_NODE_45782_length_256_cov_1.683060_g45032_i0 PRJNA1118794 45782 256 1.68306 4.3086336 Orthorubulavirus mammalis 3052558 Viruses Viruses 472 1.51e-128   NTclustered gi|2562721692|gb|OQ994985.1| 2905673 g45032 i0 100 67.984375 255 0 99 0 2 256 13822 14076 Parainfluenza virus 5 strain GX2020, complete genome blastn 17404 472 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
15052671 15052671 PRJNA1118794_P_NODE_69852_length_242_cov_1.366864_g69102_i0 PRJNA1118794 69852 242 1.366864 3.30781088 Orthorubulavirus 2560195 Viruses Viruses 448 2.3799999999999995e-121   NTclustered gi|2507986953|gb|OQ348510.1| 2560580 g69102 i0 100 68.004132231405 242 0 100 0 1 242 13035 12794 Mammalian orthorubulavirus 5 isolate HLJ-W, complete genome blastn 16457 448 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
25251184 25251184 PRJNA1118794_P_NODE_14720_length_379_cov_1.307190_g13970_i0 PRJNA1118794 14720 379 1.30719 4.9542501 Orthorubulavirus 2560195 Viruses Viruses 684 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g13970 i0 99.208 63.5804749340369 379 3 100 0 1 379 15239 14861 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 24097 684 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;