RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1118794" and tax_phylum = "Halobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Halobacteriota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1118794 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29404885 29404885 PRJNA1118794_P_NODE_40809_length_267_cov_1.335052_g40059_i0 PRJNA1118794 40809 267 1.335052 3.56458884 Halobacteriota archaeon 3100168 Archaea Archaea 78.6 1.22e-14   NR MDY6866055.1 3100168 g40059 i0 50 1.93258426966292 86 40 93.3 1 3 251 210 295 MDY6866055.1 PEP/pyruvate-binding domain-containing protein [Halobacteriota archaeon] diamond 516 78.6 1 Archaea   Methanobacteriati Halobacteriota         Halobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;