RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1118794" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1118794 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27289284 27289284 PRJNA1118794_P_NODE_19263_length_343_cov_1.140741_g18513_i0 PRJNA1118794 19263 343 1.140741 3.91274163 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 59.7 3.89e-8   NR KAG9393502.1 201153 g18513 i0 37.9 0.760932944606414 87 47 73.5 2 329 78 110 192 KAG9393502.1 Chromo (CHRromatin Organization MOdifier) domain [Carpediemonas membranifera] diamond 261 59.7 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30447384 30447384 PRJNA1118794_P_NODE_43973_length_260_cov_1.582888_g43223_i0 PRJNA1118794 43973 260 1.582888 4.1155088 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 48.1 5.61e-4   NR GKT36552.1 2918883 g43223 i0 42.1 0.657692307692308 57 28 65.8 1 236 66 416 467 GKT36552.1 cellulase (glycosyl hydrolase family 5) subfamily protein [Aduncisulcus paluster] diamond 171 48.1 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
30668317 30668317 PRJNA1118794_P_NODE_18673_length_347_cov_1.124088_g17923_i0 PRJNA1118794 18673 347 1.124088 3.90058536 Giardia intestinalis 5741 Fornicata other_Eukaryota 46.2 0.00735   NR ESU36296.1 5741 g17923 i0 44.2 0.371757925072046 43 24 37.2 0 208 336 575 617 ESU36296.1 Variant-specific surface protein, partial [Giardia intestinalis] diamond 129 46.2 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32430349 32430349 PRJNA1118794_P_NODE_9359_length_461_cov_2.363402_g8611_i0 PRJNA1118794 9359 461 2.363402 10.89528322 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 112 6.640000000000001e-27   NR KAG9391426.1 201153 g8611 i0 48.8 1.58134490238612 121 51 78.7 1 97 459 12 121 KAG9391426.1 Hydrogenosomal membrane protein 31-like [Carpediemonas membranifera] diamond 729 112 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;