RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where bioproject = "PRJNA1118794" and tax_phylum = "Candidatus Electryoneota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Electryoneota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1118794 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27415994 27415994 PRJNA1118794_P_NODE_75823_length_226_cov_2.183007_g75073_i0 PRJNA1118794 75823 226 2.183007 4.93359582 Candidatus Hatepunaea meridiana 3039650 Bacteria Bacteria 50.1 5.05e-5   NR MDP8237724.1 3039650 g75073 i0 42.6 0.809734513274336 61 31 78.3 2 220 44 105 163 MDP8237724.1 hypoxanthine phosphoribosyltransferase [Candidatus Hatepunaea meridiana] diamond 183 50.1 1 Bacteria FCB group Pseudomonadati Candidatus Electryoneota Candidatus Electryoneia Candidatus Hatepunaeales Candidatus Hatepunaeaceae Candidatus Hatepunaea Candidatus Hatepunaea meridiana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;