contig_metadata
5 rows where bioproject = "PRJNA1118794", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10434559 | 10434559 | PRJNA1118794_P_NODE_70989_length_242_cov_0.911243_g70239_i0 | PRJNA1118794 | 70989 | 242 | 0.911243 | 2.20520806 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 52.8 | 0.022 | NTclustered | gi|1811096122|gb|MN616644.1| | 11676 | g70239 | i0 | 100 | 0.115702479338843 | 28 | 0 | 12 | 0 | 172 | 199 | 375 | 348 | HIV-1 isolate NU4P_052715G10 pol protein (pol) and gag protein (gag) genes, partial cds | blastn | 28 | 52.8 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 14259707 | 14259707 | PRJNA1118794_P_NODE_40372_length_268_cov_1.374359_g39622_i0 | PRJNA1118794 | 40372 | 268 | 1.374359 | 3.68328212 | Alpharetrovirus avileu | 3426267 | Viruses | Viruses | 481 | 2.64e-131 | NTclustered | gi|1778014156|gb|MK951780.1| | 11864 | g39622 | i0 | 98.889 | 100.75 | 270 | 1 | 100 | 1 | 1 | 268 | 1615 | 1346 | Avian leukosis virus isolate S0322C, complete genome | blastn | 27001 | 481 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Alpharetrovirus | Alpharetrovirus avileu | ||
| 19356648 | 19356648 | PRJNA1118794_P_NODE_43496_length_261_cov_1.611702_g42746_i0 | PRJNA1118794 | 43496 | 261 | 1.611702 | 4.20654222 | Alpharetrovirus avileu | 3426267 | Viruses | Viruses | 431 | 2.62e-116 | NTclustered | gi|1851142711|gb|MN735307.1| | 11864 | g42746 | i0 | 97.244 | 97.3218390804598 | 254 | 7 | 97 | 0 | 1 | 254 | 2861 | 3114 | Avian leukosis virus isolate SH18JY02, complete genome | blastn | 25401 | 431 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Alpharetrovirus | Alpharetrovirus avileu | ||
| 27415956 | 27415956 | PRJNA1118794_P_NODE_27823_length_301_cov_1.350877_g27073_i0 | PRJNA1118794 | 27823 | 301 | 1.350877 | 4.06613977 | Banana streak MY virus | 1476909 | Viruses | Viruses | 47 | 0.00252 | NR | QVG60622.1 | 1476909 | g27073 | i0 | 31 | 0.578073089700997 | 58 | 38 | 57.8 | 1 | 180 | 7 | 853 | 908 | QVG60622.1 ORFIII polyprotein [Banana streak MY virus] | diamond | 174 | 47 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Caulimoviridae | Badnavirus | Badnavirus gammavirgamusae | ||
| 27952515 | 27952515 | PRJNA1118794_P_NODE_31285_length_289_cov_1.134259_g30535_i0 | PRJNA1118794 | 31285 | 289 | 1.134259 | 3.27800851 | Bovine leukemia virus | 11901 | Viruses | Viruses | 44.3 | 0.019 | NR | BDY33775.1 | 11901 | g30535 | i0 | 66.7 | 0.249134948096886 | 24 | 8 | 24.9 | 0 | 72 | 1 | 343 | 366 | BDY33775.1 gag-pro-pol polyprotein [Bovine leukemia virus] | diamond | 72 | 44.3 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Deltaretrovirus | Deltaretrovirus bovleu |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;