RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1118794", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA1118794 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27943585 27943585 PRJNA1118794_P_NODE_49025_length_251_cov_0.865169_g48275_i0 PRJNA1118794 49025 251 0.865169 2.17157419 Bacillati 1783272 Bacteria Bacteria 89 2.22e-18   NR HXC42794.1 2052315 g48275 i0 62.5 2.65338645418327 72 26 84.9 1 213 1 251 322 HXC42794.1 IPT/TIG domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 666 89 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
29057693 29057693 PRJNA1118794_P_NODE_70828_length_242_cov_0.911243_g70078_i0 PRJNA1118794 70828 242 0.911243 2.20520806 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 54.7 2.24e-6   NR HXM91454.1 2052315 g70078 i0 72.2 0.966942148760331 36 10 44.6 0 122 15 64 99 HXM91454.1 hypothetical protein [Candidatus Dormiibacterota bacterium] diamond 234 54.7 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31481486 31481486 PRJNA1118794_P_NODE_43656_length_261_cov_1.265957_g42906_i0 PRJNA1118794 43656 261 1.265957 3.30414777 Bacillati 1783272 Bacteria Bacteria 127 1.03e-33   NR MDQ6747072.1 2052315 g42906 i0 72.4 8.98850574712644 87 23 98.9 1 1 258 40 126 MDQ6747072.1 aldo/keto reductase [Candidatus Dormiibacterota bacterium] diamond 2346 127 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;