RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1118794", tax_clade = "Provora" and tax_phylum = "Nebulidia"

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tax_superkingdom 1

tax_phylum 1

  • Nebulidia · 2 ✖

tax_clade 1

  • Provora · 2 ✖

bioproject 1

  • PRJNA1118794 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1505442 1505442 PRJNA1118794_P_NODE_37522_length_274_cov_1.437811_g36772_i0 PRJNA1118794 37522 274 1.437811 3.93960214 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 113 1.14e-20   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g36772 i0 95.714 4.92700729927007 70 3 26 0 1 70 9691 9760 Ancoracysta twista mitochondrion, complete genome blastn 1350 113 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
16807444 16807444 PRJNA1118794_P_NODE_11754_length_416_cov_10.361516_g11006_i0 PRJNA1118794 11754 416 10.361516 43.10390656 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 327 5.940000000000001e-85   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g11006 i0 81.401 74.2259615384615 414 65 99 11 6 416 7310 6906 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 30878 327 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;