RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where bioproject = "PRJNA1115053" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1115053 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
229184 229184 PRJNA1115053_S_NODE_70101_length_297_cov_3.645669_g68284_i0 PRJNA1115053 70101 297 3.645669 10.82763693 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.028   NTclustered gi|690493181|emb|LN038990.1| 99802 g68284 i0 100 0.0942760942760943 28 0 9 0 20 47 78 51 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0038092 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
2773183 2773183 PRJNA1115053_S_NODE_107323_length_252_cov_1.712919_g105506_i0 PRJNA1115053 107323 252 1.712919 4.31655588 Diplorchis hangzhouensis 1131906 Platyhelminthes Platyhelminthes 54.7 0.006   NTclustered gi|379771686|gb|JQ038227.1| 1131906 g105506 i0 100 0.115079365079365 29 0 12 0 147 175 5361 5389 Diplorchis hangzhouensis mitochondrion sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Diplorchis Diplorchis hangzhouensis
4055762 4055762 PRJNA1115053_S_NODE_58444_length_318_cov_2.683636_g56627_i0 PRJNA1115053 58444 318 2.683636 8.53396248 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 257 5.8800000000000006e-64   NTclustered gi|60698656|gb|AY915745.1| 6182 g56627 i0 95.679 12.3993710691824 162 3 50 1 1 158 43 204 Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds blastn 3943 257 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
5329818 5329818 PRJNA1115053_S_NODE_288985_length_164_cov_1.586777_g287168_i0 PRJNA1115053 288985 164 1.586777 2.60231428 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 303 3.42e-78   NTclustered gi|60687985|gb|AY915105.1| 6182 g287168 i0 100 17.2134146341463 164 0 100 0 1 164 298 461 Schistosoma japonicum SJCHGC03015 protein mRNA, complete cds blastn 2823 303 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
7877888 7877888 PRJNA1115053_S_NODE_209547_length_190_cov_1.306122_g207730_i0 PRJNA1115053 209547 190 1.306122 2.4816318 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.016   NTclustered gi|690520181|emb|LN071303.1| 99802 g207730 i0 100 0.294736842105263 28 0 15 0 99 126 169 196 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0068749 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
10429258 10429258 PRJNA1115053_S_NODE_241829_length_178_cov_1.777778_g240012_i0 PRJNA1115053 241829 178 1.777778 3.16444484 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 209 8.44e-50   NTclustered gi|28317869|gb|AY223392.1| 6182 g240012 i0 87.978 4.65168539325843 183 14 100 3 1 178 187 366 Schistosoma japonicum clone ZZZ294 mRNA sequence blastn 828 209 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
19355707 19355707 PRJNA1115053_S_NODE_91476_length_268_cov_4.208889_g89659_i0 PRJNA1115053 91476 268 4.208889 11.27982252 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 154 6.54e-33   NTclustered gi|56407631|gb|AY834397.1| 6183 g89659 i0 94.898 17.8805970149254 98 5 37 0 171 268 39 136 Schistosoma mansoni IGF-I precursor-like gene, intron 2 blastn 4792 154 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
24449692 24449692 PRJNA1115053_S_NODE_146500_length_221_cov_14.359551_g144683_i0 PRJNA1115053 146500 221 14.359551 31.73460771 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 381 2.2e-101   NTclustered gi|60698688|gb|AY915747.1| 6182 g144683 i0 97.738 2.37556561085973 221 5 100 0 1 221 282 62 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 525 381 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
24450046 24450046 PRJNA1115053_S_NODE_161520_length_212_cov_5.721893_g159703_i0 PRJNA1115053 161520 212 5.721893 12.13041316 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 261 2.84e-65   NTclustered gi|60700756|gb|AY915859.1| 6182 g159703 i0 88.889 1.35377358490566 216 19 99 1 1 211 217 2 Schistosoma japonicum SJCHGC09793 protein mRNA, complete cds blastn 287 261 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
26783349 26783349 PRJNA1115053_S_NODE_262461_length_172_cov_1.116279_g260644_i0 PRJNA1115053 262461 172 1.116279 1.91999988 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 92 6.1300000000000005e-22   NR AAX25839.2 6182 g260644 i0 84.9 0.924418604651163 53 8 92.4 0 172 14 60 112 AAX25839.2 SJCHGC09516 protein, partial [Schistosoma japonicum] diamond 159 92 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
27605275 27605275 PRJNA1115053_S_NODE_25604_length_423_cov_3.215789_g23795_i0 PRJNA1115053 25604 423 3.215789 13.60278747 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 101 6.15e-24   NR AAX25032.2 6182 g23795 i0 66.2 0.546099290780142 77 26 54.6 0 248 18 104 180 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 231 101 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
27857622 27857622 PRJNA1115053_S_NODE_129605_length_233_cov_2.273684_g127788_i0 PRJNA1115053 129605 233 2.273684 5.29768372 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 90.5 2.5600000000000003e-21   NR AAX24812.2 6182 g127788 i0 74.1 0.695278969957081 54 14 69.5 0 3 164 4 57 AAX24812.2 SJCHGC04011 protein, partial [Schistosoma japonicum] diamond 162 90.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
28236325 28236325 PRJNA1115053_S_NODE_192046_length_197_cov_2.181818_g190229_i0 PRJNA1115053 192046 197 2.181818 4.29818146 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 53.1 7.14e-7   NR AAX24812.2 6182 g190229 i0 65 1.96446700507614 40 9 53.3 1 191 87 17 56 AAX24812.2 SJCHGC04011 protein, partial [Schistosoma japonicum] diamond 387 53.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
28362741 28362741 PRJNA1115053_S_NODE_217546_length_187_cov_1.000000_g215729_i0 PRJNA1115053 217546 187 1 1.87 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 45.1 0.0013   NR XP_018644101.1 6183 g215729 i0 44 18.7058823529412 50 28 80.2 0 11 160 101 150 XP_018644101.1 hypothetical protein Smp_191100 [Schistosoma mansoni] diamond 3498 45.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
28552493 28552493 PRJNA1115053_S_NODE_38067_length_370_cov_2.840979_g36250_i0 PRJNA1115053 38067 370 2.840979 10.5116223 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 69.7 7.79e-12   NR AAX25032.2 6182 g36250 i0 59.6 0.381081081081081 47 19 38.1 0 109 249 90 136 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 141 69.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
28615567 28615567 PRJNA1115053_S_NODE_308867_length_159_cov_1.241379_g307050_i0 PRJNA1115053 308867 159 1.241379 1.97379261 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 57 6.2e-9   NR AAX30341.2 6182 g307050 i0 76.9 0.735849056603774 39 8 73.6 1 125 9 51 88 AAX30341.2 SJCHGC03035 protein [Schistosoma japonicum] diamond 117 57 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
28741776 28741776 PRJNA1115053_S_NODE_232927_length_181_cov_1.739130_g231110_i0 PRJNA1115053 232927 181 1.73913 3.1478253 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 40.8 0.0102   NR AAX30326.1 6182 g231110 i0 55.2 1.06077348066298 29 13 48.1 0 179 93 29 57 AAX30326.1 SJCHGC03015 protein [Schistosoma japonicum] diamond 192 40.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
29910206 29910206 PRJNA1115053_S_NODE_260831_length_172_cov_1.728682_g259014_i0 PRJNA1115053 260831 172 1.728682 2.97333304 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 88.2 5.5e-20   NR AAX25963.2 6182 g259014 i0 97.6 0.715116279069767 41 1 71.5 0 1 123 100 140 AAX25963.2 SJCHGC04741 protein, partial [Schistosoma japonicum] diamond 123 88.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30162553 30162553 PRJNA1115053_S_NODE_184032_length_201_cov_1.518987_g182215_i0 PRJNA1115053 184032 201 1.518987 3.05316387 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 83.6 8.81e-19   NR AAX24812.2 6182 g182215 i0 71.2 2.29850746268657 52 15 77.6 0 199 44 6 57 AAX24812.2 SJCHGC04011 protein, partial [Schistosoma japonicum] diamond 462 83.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30384392 30384392 PRJNA1115053_S_NODE_4373_length_809_cov_18.231070_g3295_i0 PRJNA1115053 4373 809 18.23107 147.4893563 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 49.7 2.53e-4   NR ABA40899.1 6182 g3295 i0 59 0.144622991347342 39 14 13.7 1 355 245 4 42 ABA40899.1 SJCHGC09658 protein, partial [Schistosoma japonicum] diamond 117 49.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30447331 30447331 PRJNA1115053_S_NODE_323513_length_155_cov_2.142857_g321696_i0 PRJNA1115053 323513 155 2.142857 3.32142835 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 72 1.66e-14   NR AAX24812.2 6182 g321696 i0 64 2.92258064516129 50 15 96.8 1 3 152 6 52 AAX24812.2 SJCHGC04011 protein, partial [Schistosoma japonicum] diamond 453 72.4 0.994475138121547 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30478874 30478874 PRJNA1115053_S_NODE_178993_length_203_cov_2.818750_g177176_i0 PRJNA1115053 178993 203 2.81875 5.7220625 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 105 1.6700000000000002e-26   NR AAX25032.2 6182 g177176 i0 91.1 0.827586206896552 56 3 79.8 1 163 2 131 186 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 168 105 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30636560 30636560 PRJNA1115053_S_NODE_179533_length_203_cov_1.800000_g177716_i0 PRJNA1115053 179533 203 1.8 3.654 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 57 2.44e-8   NR AAX24812.2 6182 g177716 i0 70.6 1.64039408866995 34 10 50.2 0 101 202 1 34 AAX24812.2 SJCHGC04011 protein, partial [Schistosoma japonicum] diamond 333 57 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31205010 31205010 PRJNA1115053_S_NODE_352755_length_151_cov_0.888889_g350938_i0 PRJNA1115053 352755 151 0.888889 1.34222239 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 70.5 6.13e-14   NR ABA40296.1 6182 g350938 i0 94.3 0.695364238410596 35 2 69.5 0 45 149 1 35 ABA40296.1 SJCHGC09003 protein, partial [Schistosoma japonicum] diamond 105 70.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31806419 31806419 PRJNA1115053_S_NODE_264697_length_171_cov_1.500000_g262880_i0 PRJNA1115053 264697 171 1.5 2.565 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 51.2 1.75e-6   NR AAX26836.2 6182 g262880 i0 76.7 1.57894736842105 30 7 52.6 0 62 151 70 99 AAX26836.2 SJCHGC03019 protein, partial [Schistosoma japonicum] diamond 270 51.6 0.992248062015504 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31996286 31996286 PRJNA1115053_S_NODE_274578_length_168_cov_1.536000_g272761_i0 PRJNA1115053 274578 168 1.536 2.58048 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 49.3 1.5e-5   NR AAX24812.2 6182 g272761 i0 74.1 1.91071428571429 27 7 48.2 0 2 82 32 58 AAX24812.2 SJCHGC04011 protein, partial [Schistosoma japonicum] diamond 321 49.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
32597376 32597376 PRJNA1115053_S_NODE_99620_length_259_cov_3.648148_g97803_i0 PRJNA1115053 99620 259 3.648148 9.44870332 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 98.2 1.1500000000000002e-21   NR AAX28387.3 6182 g97803 i0 74 3.38223938223938 73 19 84.6 0 257 39 108 180 AAX28387.3 SJCHGC01615 protein, partial [Schistosoma japonicum] diamond 876 98.6 0.995943204868154 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
32723251 32723251 PRJNA1115053_S_NODE_18060_length_476_cov_3.695150_g16270_i0 PRJNA1115053 18060 476 3.69515 17.588914 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 82.8 1.88e-17   NR AAX30341.2 6182 g16270 i0 55.3 2.57773109243697 85 38 53.6 0 118 372 4 88 AAX30341.2 SJCHGC03035 protein [Schistosoma japonicum] diamond 1227 83.2 0.995192307692308 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
32817633 32817633 PRJNA1115053_S_NODE_142200_length_224_cov_2.983425_g140383_i0 PRJNA1115053 142200 224 2.983425 6.682872 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 49.7 9.46e-6   NR AAX30454.1 6182 g140383 i0 92.3 0.348214285714286 26 2 34.8 0 223 146 55 80 AAX30454.1 SJCHGC03747 protein [Schistosoma japonicum] diamond 78 49.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
32880568 32880568 PRJNA1115053_S_NODE_107120_length_252_cov_2.133971_g105303_i0 PRJNA1115053 107120 252 2.133971 5.37760692 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 151 2.17e-44   NR AAX25032.2 6182 g105303 i0 87.7 0.964285714285714 81 10 96.4 0 2 244 89 169 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 243 151 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;