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contig_metadata

10 rows where bioproject = "PRJNA1115053" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1115053 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4050316 4050316 PRJNA1115053_S_NODE_143544_length_223_cov_4.722222_g141727_i0 PRJNA1115053 143544 223 4.722222 10.53055506 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 110 1.16e-19   NTclustered gi|560190589|gb|KF633467.1| 91374 g141727 i0 84.615 36.4843049327354 117 11 52 6 109 223 2588 2477 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 8136 110 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
4852681 4852681 PRJNA1115053_S_NODE_50344_length_336_cov_1.515358_g48527_i0 PRJNA1115053 50344 336 1.515358 5.09160288 Entosiphon 101492 Euglenozoa other_Eukaryota 296 1.33e-75   NTclustered gi|41400272|gb|AY425008.1| 259048 g48527 i0 89.54 4.91369047619048 239 18 71 7 29 266 1191 959 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 1651 296 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
11227584 11227584 PRJNA1115053_S_NODE_132249_length_231_cov_2.505319_g130432_i0 PRJNA1115053 132249 231 2.505319 5.78728689 Entosiphon 101492 Euglenozoa other_Eukaryota 318 1.84e-82   NTclustered gi|37542663|gb|AY061999.1| 101493 g130432 i0 91.703 3.96536796536797 229 19 99 0 3 231 1833 2061 Entosiphon sulcatum small subunit ribosomal RNA gene, partial sequence blastn 916 318 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
13778043 13778043 PRJNA1115053_S_NODE_70751_length_296_cov_3.537549_g68934_i0 PRJNA1115053 70751 296 3.537549 10.47114504 Bodo 5712 Euglenozoa other_Eukaryota 547 2.8799999999999986e-151   NTclustered gi|20331094|gb|AY028452.1| 75058 g68934 i0 100 86.0101351351351 296 0 100 0 1 296 1040 1335 Bodo saltans 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25459 547 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
14253800 14253800 PRJNA1115053_S_NODE_200812_length_193_cov_4.453333_g198995_i0 PRJNA1115053 200812 193 4.453333 8.59493269 Trypanosomatidae sp. 1737640 Euglenozoa other_Eukaryota 311 2.49e-80   NTclustered gi|2022380702|gb|MW874579.1| 1737640 g198995 i0 95.833 156.170984455959 192 8 99 0 1 192 307 116 Trypanosomatidae sp. isolate DN36 large subunit ribosomal RNA gene, partial sequence blastn 30141 311 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae   Trypanosomatidae sp.
15052059 15052059 PRJNA1115053_S_NODE_232152_length_181_cov_2.782609_g230335_i0 PRJNA1115053 232152 181 2.782609 5.03652229 Trypanosoma 5690 Euglenozoa other_Eukaryota 174 3.14e-39   NTclustered gi|46091659|dbj|AB175623.1| 169531 g230335 i0 92.562 80.3093922651934 121 9 67 0 61 181 7457 7337 Trypanosoma grosi genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-7, isolate: HANTO blastn 14536 174 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grosi
20624753 20624753 PRJNA1115053_S_NODE_151677_length_218_cov_2.857143_g149860_i0 PRJNA1115053 151677 218 2.857143 6.22857174 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 54.7 0.005   NTclustered gi|342182322|emb|HE575321.1| 1068625 g149860 i0 100 0.261467889908257 29 0 13 0 89 117 272840 272812 Trypanosoma congolense IL3000 annotated genomic contig, chromosome 8 blastn 57 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
23976995 23976995 PRJNA1115053_S_NODE_51199_length_334_cov_1.536082_g49382_i0 PRJNA1115053 51199 334 1.536082 5.13051388 Bodo 5712 Euglenozoa other_Eukaryota 468 2.64e-127   NTclustered gi|20331091|gb|AY028449.1| 155205 g49382 i0 94.983 89.9311377245509 299 13 89 2 38 334 2158 1860 Bodo sp. ATCC 50149 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30037 470 0.995744680851064 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo sp. ATCC 50149
27952476 27952476 PRJNA1115053_S_NODE_305385_length_160_cov_1.230769_g303568_i0 PRJNA1115053 305385 160 1.230769 1.9692304 Trypanosoma congolense IL3 5692 Euglenozoa other_Eukaryota 46.2 7.29e-4   NR CCD14949.1 1068625 g303568 i0 44.1 3.975 59 25 95.6 1 7 159 398 456 CCD14949.1 unnamed protein product [Trypanosoma congolense IL3000] diamond 636 46.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
31679736 31679736 PRJNA1115053_S_NODE_356057_length_150_cov_1.794393_g354240_i0 PRJNA1115053 356057 150 1.794393 2.6915895 Bodo saltans 75058 Euglenozoa other_Eukaryota 78.2 4.7e-16   NR CUG10349.1 75058 g354240 i0 79.2 4.88 48 10 96 0 6 149 162 209 CUG10349.1 40S ribosomal protein S8, putative [Bodo saltans] diamond 732 78.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;