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contig_metadata

20 rows where bioproject = "PRJNA1115053" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1115053 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1503546 1503546 PRJNA1115053_S_NODE_52362_length_331_cov_2.934028_g50545_i0 PRJNA1115053 52362 331 2.934028 9.71163268 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 340 5.94e-89   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g50545 i0 85.893 43.4078549848943 319 45 96 0 6 324 3557986 3557668 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 14368 340 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
9154919 9154919 PRJNA1115053_S_NODE_30488_length_399_cov_6.806180_g28676_i0 PRJNA1115053 30488 399 6.80618 27.1566582 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 176 2.17e-39   NTclustered gi|2874254027|emb|OY970352.1| 171953 g28676 i0 77.918 3.6516290726817 317 47 77 19 68 374 3020140 3019837 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 1457 176 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19351037 19351037 PRJNA1115053_S_NODE_214376_length_188_cov_1.324138_g212559_i0 PRJNA1115053 214376 188 1.324138 2.48937944 Acidobacteriota bacterium 1978231 Bacteria Bacteria 82.8 4.53e-17   NR MDQ3321255.1 1978231 g212559 i0 74.1 1.72340425531915 54 14 86.2 0 27 188 235 288 MDQ3321255.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein [Acidobacteriota bacterium] diamond 324 82.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27036371 27036371 PRJNA1115053_S_NODE_227082_length_183_cov_1.800000_g225265_i0 PRJNA1115053 227082 183 1.8 3.294 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 41.6 0.0371   NR MDX6458592.1 2052142 g225265 i0 46.3 1.19672131147541 41 22 67.2 0 179 57 46 86 MDX6458592.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 219 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
27352724 27352724 PRJNA1115053_S_NODE_194903_length_196_cov_1.568627_g193086_i0 PRJNA1115053 194903 196 1.568627 3.07450892 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 93.2 1.44e-21   NR HEX8287632.1 2283092 g193086 i0 75 1.95918367346939 64 16 98 0 3 194 63 126 HEX8287632.1 HAD family hydrolase [Pyrinomonadaceae bacterium] diamond 384 93.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27415920 27415920 PRJNA1115053_S_NODE_274003_length_168_cov_1.984000_g272186_i0 PRJNA1115053 274003 168 1.984 3.33312 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 40.8 0.0212   NR HEY5444364.1 2283092 g272186 i0 33.3 0.75 42 25 75 1 27 152 37 75 HEY5444364.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 126 40.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28710353 28710353 PRJNA1115053_S_NODE_137187_length_228_cov_1.324324_g135370_i0 PRJNA1115053 137187 228 1.324324 3.01945872 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 68.2 1.26e-12   NR HEX8251201.1 2283092 g135370 i0 73.3 0.986842105263158 75 16 98.7 1 1 225 9 79 HEX8251201.1 BON domain-containing protein [Pyrinomonadaceae bacterium] diamond 225 68.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28963004 28963004 PRJNA1115053_S_NODE_178308_length_204_cov_1.192547_g176491_i0 PRJNA1115053 178308 204 1.192547 2.43279588 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 90.9 5.930000000000001e-21   NR HEY0051392.1 2283092 g176491 i0 72.3 0.955882352941177 65 18 95.6 0 2 196 98 162 HEY0051392.1 Spy/CpxP family protein refolding chaperone [Pyrinomonadaceae bacterium] diamond 195 90.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28994629 28994629 PRJNA1115053_S_NODE_106308_length_253_cov_1.600000_g104491_i0 PRJNA1115053 106308 253 1.6 4.048 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.1 0.032   NR HEY6217504.1 2283092 g104491 i0 33.8 1.54150197628458 65 34 66.4 1 25 192 488 552 HEY6217504.1 PQQ-dependent sugar dehydrogenase [Pyrinomonadaceae bacterium] diamond 390 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29026247 29026247 PRJNA1115053_S_NODE_200948_length_193_cov_3.026667_g199131_i0 PRJNA1115053 200948 193 3.026667 5.84146731 Terriglobales bacterium 2282142 Bacteria Bacteria 42 0.0289   NR HYM05365.1 2282142 g199131 i0 38.6 1.0880829015544 70 32 91.7 1 3 179 76 145 HYM05365.1 isoprenylcysteine carboxylmethyltransferase family protein [Terriglobales bacterium] diamond 210 42 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
29120864 29120864 PRJNA1115053_S_NODE_205869_length_191_cov_2.594595_g204052_i0 PRJNA1115053 205869 191 2.594595 4.95567645 Holophagaceae bacterium 2052165 Bacteria Bacteria 41.6 0.0271   NR HJV89555.1 2052165 g204052 i0 41.1 0.879581151832461 56 29 88 2 24 191 44 95 HJV89555.1 hypothetical protein [Holophagaceae bacterium] diamond 168 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae   Holophagaceae bacterium
29183994 29183994 PRJNA1115053_S_NODE_216689_length_187_cov_1.666667_g214872_i0 PRJNA1115053 216689 187 1.666667 3.11666729 Blastocatellia bacterium 2052146 Bacteria Bacteria 41.6 0.0457   NR HEU0184367.1 2052146 g214872 i0 36.8 0.609625668449198 38 24 61 0 154 41 300 337 HEU0184367.1 hypothetical protein [Blastocatellia bacterium] diamond 114 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29404836 29404836 PRJNA1115053_S_NODE_181589_length_202_cov_1.811321_g179772_i0 PRJNA1115053 181589 202 1.811321 3.65886842 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 111 4.630000000000001e-27   NR HQU81800.1 2283092 g179772 i0 83.6 0.995049504950495 67 11 99.5 0 202 2 35 101 HQU81800.1 cupredoxin domain-containing protein [Pyrinomonadaceae bacterium] diamond 201 111 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29499458 29499458 PRJNA1115053_S_NODE_144670_length_223_cov_1.311111_g142853_i0 PRJNA1115053 144670 223 1.311111 2.92377753 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 42.7 0.0296   NR HEY2544787.1 3069120 g142853 i0 32.8 0.820627802690583 61 41 82.1 0 32 214 5 65 HEY2544787.1 DNA polymerase I [Candidatus Acidiferrum sp.] diamond 183 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
30099430 30099430 PRJNA1115053_S_NODE_129872_length_233_cov_1.768421_g128055_i0 PRJNA1115053 129872 233 1.768421 4.12042093 Terriglobales bacterium 2282142 Bacteria Bacteria 42.7 0.0318   NR MFL6439215.1 2282142 g128055 i0 41.7 0.618025751072961 48 25 61.8 1 209 66 80 124 MFL6439215.1 glycosyltransferase [Terriglobales bacterium] diamond 144 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
32186175 32186175 PRJNA1115053_S_NODE_279038_length_167_cov_1.161290_g277221_i0 PRJNA1115053 279038 167 1.16129 1.9393543 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42 0.0249   NR MEE2636171.1 1978231 g277221 i0 50 0.646706586826347 36 18 64.7 0 39 146 139 174 MEE2636171.1 ComEC/Rec2 family competence protein [Acidobacteriota bacterium] diamond 108 42 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32217782 32217782 PRJNA1115053_S_NODE_110318_length_249_cov_2.097087_g108501_i0 PRJNA1115053 110318 249 2.097087 5.22174663 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.5 0.022   NR HEX9425746.1 2283092 g108501 i0 46.2 1.87951807228916 52 25 62.7 1 245 90 848 896 HEX9425746.1 glucoamylase family protein [Pyrinomonadaceae bacterium] diamond 468 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32249710 32249710 PRJNA1115053_S_NODE_233218_length_181_cov_1.471014_g231401_i0 PRJNA1115053 233218 181 1.471014 2.66253534 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 41.2 0.0161   NR HEX7778990.1 2910147 g231401 i0 44.4 0.74585635359116 45 25 74.6 0 2 136 44 88 HEX7778990.1 hypothetical protein [Vicinamibacterales bacterium] diamond 135 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32407631 32407631 PRJNA1115053_S_NODE_118099_length_242_cov_2.633166_g116282_i0 PRJNA1115053 118099 242 2.633166 6.37226172 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 40 0.0488   NR MFV0388867.1 2283092 g116282 i0 51.6 0.384297520661157 31 15 38.4 0 240 148 28 58 MFV0388867.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 93 40 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32880576 32880576 PRJNA1115053_S_NODE_278860_length_167_cov_1.161290_g277043_i0 PRJNA1115053 278860 167 1.16129 1.9393543 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 42.7 0.00346   NR HXD19284.1 2910147 g277043 i0 50 0.574850299401198 32 16 57.5 0 1 96 62 93 HXD19284.1 hypothetical protein [Vicinamibacterales bacterium] diamond 96 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;