RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA1115053", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 12 ✖

tax_kingdom 1

  • Orthornavirae · 12 ✖

bioproject 1

  • PRJNA1115053 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
229689 229689 PRJNA1115053_S_NODE_88681_length_272_cov_1.257642_g86864_i0 PRJNA1115053 88681 272 1.257642 3.42078624 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.007   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g86864 i0 100 0.209558823529412 29 0 11 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
1498080 1498080 PRJNA1115053_S_NODE_140042_length_226_cov_1.409836_g138225_i0 PRJNA1115053 140042 226 1.409836 3.18622936 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g138225 i0 100 0.623893805309734 29 0 13 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
4051585 4051585 PRJNA1115053_S_NODE_198084_length_195_cov_0.947368_g196267_i0 PRJNA1115053 198084 195 0.947368 1.8473676 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.001   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g196267 i0 94.595 0.333333333333333 37 0 18 2 161 195 42 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 65 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
7876789 7876789 PRJNA1115053_S_NODE_164907_length_211_cov_1.059524_g163090_i0 PRJNA1115053 164907 211 1.059524 2.23559564 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g163090 i0 100 0.270142180094787 29 0 14 0 183 211 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
11703074 11703074 PRJNA1115053_S_NODE_182550_length_202_cov_1.056604_g180733_i0 PRJNA1115053 182550 202 1.056604 2.13434008 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g180733 i0 100 0.698019801980198 29 0 14 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
11703663 11703663 PRJNA1115053_S_NODE_206990_length_191_cov_1.297297_g205173_i0 PRJNA1115053 206990 191 1.297297 2.47783727 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g205173 i0 100 0.743455497382199 30 0 16 0 162 191 42 13 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12976664 12976664 PRJNA1115053_S_NODE_118011_length_242_cov_3.070352_g116194_i0 PRJNA1115053 118011 242 3.070352 7.43025184 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g116194 i0 100 0.582644628099174 29 0 12 0 214 242 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
15532124 15532124 PRJNA1115053_S_NODE_80553_length_282_cov_1.807531_g78736_i0 PRJNA1115053 80553 282 1.807531 5.09723742 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 5.59e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g78736 i0 92.683 0.656028368794326 41 2 15 1 242 282 52 13 Carnation latent virus isolate KL, complete genome blastn 185 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
18077154 18077154 PRJNA1115053_S_NODE_229735_length_182_cov_1.956835_g227918_i0 PRJNA1115053 229735 182 1.956835 3.5614397 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.004   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g227918 i0 100 0.313186813186813 29 0 16 0 154 182 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
18081323 18081323 PRJNA1115053_S_NODE_86815_length_274_cov_1.974026_g84998_i0 PRJNA1115053 86815 274 1.974026 5.40883124 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g84998 i0 100 0.631386861313869 29 0 11 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 173 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
20624416 20624416 PRJNA1115053_S_NODE_137877_length_227_cov_2.657609_g136060_i0 PRJNA1115053 137877 227 2.657609 6.03277243 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g136060 i0 100 0.251101321585903 29 0 13 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
24450415 24450415 PRJNA1115053_S_NODE_176600_length_204_cov_36.391304_g174783_i0 PRJNA1115053 176600 204 36.391304 74.23826016 Jujube closterovirus 1 3043313 Viruses Viruses 58.4 3.83e-4   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g174783 i0 100 0.28921568627451 31 0 15 0 1 31 6 36 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 59 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;