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contig_metadata

29 rows where bioproject = "PRJNA1115053" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 29 ✖

bioproject 1

  • PRJNA1115053 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
226883 226883 PRJNA1115053_S_NODE_295181_length_162_cov_2.571429_g293364_i0 PRJNA1115053 295181 162 2.571429 4.16571498 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 239 9.64e-59   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g293364 i0 93.21 1 162 11 100 0 1 162 4595 4434 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 162 239 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
229689 229689 PRJNA1115053_S_NODE_88681_length_272_cov_1.257642_g86864_i0 PRJNA1115053 88681 272 1.257642 3.42078624 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.007   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g86864 i0 100 0.209558823529412 29 0 11 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
1498080 1498080 PRJNA1115053_S_NODE_140042_length_226_cov_1.409836_g138225_i0 PRJNA1115053 140042 226 1.409836 3.18622936 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g138225 i0 100 0.623893805309734 29 0 13 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
2774804 2774804 PRJNA1115053_S_NODE_173423_length_206_cov_1.963190_g171606_i0 PRJNA1115053 173423 206 1.96319 4.0441714 Totiviridae sp. 1955172 Viruses Viruses 52.8 0.018   NTclustered gi|2697183262|gb|OR870822.1| 1955172 g171606 i0 100 0.271844660194175 28 0 14 0 112 139 481 508 MAG: Totiviridae sp. isolate MHSMC16/303 genomic sequence blastn 56 52.8 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
4051585 4051585 PRJNA1115053_S_NODE_198084_length_195_cov_0.947368_g196267_i0 PRJNA1115053 198084 195 0.947368 1.8473676 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.001   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g196267 i0 94.595 0.333333333333333 37 0 18 2 161 195 42 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 65 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
5328659 5328659 PRJNA1115053_S_NODE_238365_length_179_cov_2.169118_g236548_i0 PRJNA1115053 238365 179 2.169118 3.88272122 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.004   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g236548 i0 100 0.318435754189944 29 0 16 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
6602457 6602457 PRJNA1115053_S_NODE_182366_length_202_cov_1.207547_g180549_i0 PRJNA1115053 182366 202 1.207547 2.43924494 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g180549 i0 100 0.282178217821782 29 0 14 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
6605548 6605548 PRJNA1115053_S_NODE_323226_length_155_cov_2.401786_g321409_i0 PRJNA1115053 323226 155 2.401786 3.7227683 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 231 1.53e-56   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g321409 i0 94.079 0.980645161290323 152 9 98 0 4 155 2298 2147 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 152 231 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
6607302 6607302 PRJNA1115053_S_NODE_70606_length_296_cov_10.035573_g68789_i0 PRJNA1115053 70606 296 10.035573 29.70529608 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.002   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g68789 i0 100 0.388513513513513 30 0 10 0 267 296 85 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
7876789 7876789 PRJNA1115053_S_NODE_164907_length_211_cov_1.059524_g163090_i0 PRJNA1115053 164907 211 1.059524 2.23559564 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g163090 i0 100 0.270142180094787 29 0 14 0 183 211 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
7877251 7877251 PRJNA1115053_S_NODE_183967_length_201_cov_1.518987_g182150_i0 PRJNA1115053 183967 201 1.518987 3.05316387 Porcine bastrovirus 2588662 Viruses Viruses 58.4 3.76e-4   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g182150 i0 94.737 0.328358208955224 38 1 18 1 1 37 13 50 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 66 58.4 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
7878831 7878831 PRJNA1115053_S_NODE_249147_length_176_cov_1.082707_g247330_i0 PRJNA1115053 249147 176 1.082707 1.90556432 Phytophthora palustris bunya-like virus 9-1 2976288 Viruses Viruses 52.8 0.015   NTclustered gi|2395775949|gb|OL795350.1| 2976288 g247330 i0 100 0.159090909090909 28 0 16 0 87 114 5112 5085 Phytophthora palustris bunya-like virus 9-1 isolate SU0141 RNA-dependent RNA polymerase gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Phytophthora palustris bunya-like virus 9-1
9151517 9151517 PRJNA1115053_S_NODE_157988_length_214_cov_28.146199_g156171_i0 PRJNA1115053 157988 214 28.146199 60.23286586 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g156171 i0 100 0.266355140186916 29 0 14 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
11703074 11703074 PRJNA1115053_S_NODE_182550_length_202_cov_1.056604_g180733_i0 PRJNA1115053 182550 202 1.056604 2.13434008 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g180733 i0 100 0.698019801980198 29 0 14 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
11703663 11703663 PRJNA1115053_S_NODE_206990_length_191_cov_1.297297_g205173_i0 PRJNA1115053 206990 191 1.297297 2.47783727 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g205173 i0 100 0.743455497382199 30 0 16 0 162 191 42 13 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12976664 12976664 PRJNA1115053_S_NODE_118011_length_242_cov_3.070352_g116194_i0 PRJNA1115053 118011 242 3.070352 7.43025184 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g116194 i0 100 0.582644628099174 29 0 12 0 214 242 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12982759 12982759 PRJNA1115053_S_NODE_57211_length_320_cov_11.657040_g55394_i0 PRJNA1115053 57211 320 11.65704 37.302528 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.008   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g55394 i0 100 0.178125 29 0 9 0 292 320 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
15532124 15532124 PRJNA1115053_S_NODE_80553_length_282_cov_1.807531_g78736_i0 PRJNA1115053 80553 282 1.807531 5.09723742 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 5.59e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g78736 i0 92.683 0.656028368794326 41 2 15 1 242 282 52 13 Carnation latent virus isolate KL, complete genome blastn 185 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
16805912 16805912 PRJNA1115053_S_NODE_52694_length_330_cov_4.066202_g50877_i0 PRJNA1115053 52694 330 4.066202 13.4184666 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.009   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g50877 i0 100 0.172727272727273 29 0 9 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
18077154 18077154 PRJNA1115053_S_NODE_229735_length_182_cov_1.956835_g227918_i0 PRJNA1115053 229735 182 1.956835 3.5614397 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.004   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g227918 i0 100 0.313186813186813 29 0 16 0 154 182 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
18081323 18081323 PRJNA1115053_S_NODE_86815_length_274_cov_1.974026_g84998_i0 PRJNA1115053 86815 274 1.974026 5.40883124 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.007   NTclustered gi|1995060321|gb|MN450069.1| 12164 g84998 i0 100 0.631386861313869 29 0 11 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 173 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19350732 19350732 PRJNA1115053_S_NODE_201416_length_193_cov_1.940000_g199599_i0 PRJNA1115053 201416 193 1.94 3.7442 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g199599 i0 100 0.440414507772021 29 0 15 0 165 193 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 85 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
20624416 20624416 PRJNA1115053_S_NODE_137877_length_227_cov_2.657609_g136060_i0 PRJNA1115053 137877 227 2.657609 6.03277243 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g136060 i0 100 0.251101321585903 29 0 13 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
21899641 21899641 PRJNA1115053_S_NODE_116358_length_244_cov_1.407960_g114541_i0 PRJNA1115053 116358 244 1.40796 3.4354224 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g114541 i0 100 0.233606557377049 29 0 12 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
21900262 21900262 PRJNA1115053_S_NODE_141398_length_225_cov_1.582418_g139581_i0 PRJNA1115053 141398 225 1.582418 3.5604405 Grapevine wood holobiome associated narna-like virus 6 3398663 Viruses Viruses 132 2.5e-26   NTclustered gi|2905035790|gb|PV021974.1| 3398663 g139581 i0 81.818 0.733333333333333 165 22 72 7 49 209 315 155 Grapevine wood holobiome associated narna-like virus 6 isolate grp6 segment RNA4 HP1 gene, complete cds blastn 165 132 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 6
23180175 23180175 PRJNA1115053_S_NODE_338679_length_153_cov_0.872727_g336862_i0 PRJNA1115053 338679 153 0.872727 1.33527231 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 255 8.900000000000001e-64   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g336862 i0 96.753 1.00653594771242 154 4 100 1 1 153 2457 2304 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 154 255 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
24450364 24450364 PRJNA1115053_S_NODE_17420_length_481_cov_60.929224_g15634_i0 PRJNA1115053 17420 481 60.929224 293.06956744 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 640 7.859999999999999e-179   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g15634 i0 90.776 0.991683991683992 477 43 99 1 1 477 6633 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 477 640 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
24450415 24450415 PRJNA1115053_S_NODE_176600_length_204_cov_36.391304_g174783_i0 PRJNA1115053 176600 204 36.391304 74.23826016 Jujube closterovirus 1 3043313 Viruses Viruses 58.4 3.83e-4   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g174783 i0 100 0.28921568627451 31 0 15 0 1 31 6 36 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 59 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
30248879 30248879 PRJNA1115053_S_NODE_100832_length_258_cov_2.455814_g99015_i0 PRJNA1115053 100832 258 2.455814 6.33600012 Viruses 10239 Viruses Viruses 73.6 6.44e-13   NR AVM87439.1 2116200 g99015 i0 48.1 1.75581395348837 79 37 87.2 1 33 257 917 995 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 453 73.9 0.995940460081191 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Wuhan sharpbelly picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;