RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1115053", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1115053 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26846706 26846706 PRJNA1115053_S_NODE_104701_length_254_cov_2.928910_g102884_i0 PRJNA1115053 104701 254 2.92891 7.4394314 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 67.4 5.9e-11   NR CAF1212093.1 1234261 g102884 i0 72.9 0.566929133858268 48 13 56.7 0 2 145 257 304 CAF1212093.1 unnamed protein product [Didymodactylos carnosus] diamond 144 67.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
31300329 31300329 PRJNA1115053_S_NODE_119355_length_241_cov_2.424242_g117538_i0 PRJNA1115053 119355 241 2.424242 5.84242322 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 40.4 0.0453   NR CAF4388879.1 392030 g117538 i0 80 0.24896265560166 20 4 24.9 0 60 1 4 23 CAF4388879.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 60 40.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;