RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1115053", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1115053 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27920788 27920788 PRJNA1115053_S_NODE_291605_length_163_cov_2.400000_g289788_i0 PRJNA1115053 291605 163 2.4 3.912 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 63.5 3.48e-10   NR TEB19254.1 2494336 g289788 i0 50 0.920245398773006 50 24 90.2 1 8 154 214 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 150 63.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
29026258 29026258 PRJNA1115053_S_NODE_48768_length_339_cov_5.736486_g46951_i0 PRJNA1115053 48768 339 5.736486 19.44668754 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 90.5 2.4e-19   NR TEB19254.1 2494336 g46951 i0 42.6 0.893805309734513 101 53 88.5 2 4 303 167 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 303 90.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;