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contig_metadata

8 rows where bioproject = "PRJNA1115053", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1115053 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16799871 16799871 PRJNA1115053_S_NODE_114694_length_245_cov_2.202970_g112877_i0 PRJNA1115053 114694 245 2.20297 5.3972765 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 89.8 1.69e-13   NTclustered gi|325194684|emb|FR825494.1| 890382 g112877 i0 79.545 1.21224489795918 132 22 52 5 4 131 72 202 Albugo laibachii Nc14, genomic contig CONTIG_2365_NC14_v4_847_33331 blastn 297 89.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
19354468 19354468 PRJNA1115053_S_NODE_44956_length_349_cov_3.516340_g43139_i0 PRJNA1115053 44956 349 3.51634 12.2720266 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 100 1.16e-16   NTclustered gi|675165376|ref|XM_008893325.1| 761204 g43139 i0 95.312 14.6561604584527 64 1 18 2 202 264 700 638 Phytophthora parasitica INRA-310 hypothetical protein mRNA blastn 5115 100 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
19355279 19355279 PRJNA1115053_S_NODE_75976_length_288_cov_4.126531_g74159_i0 PRJNA1115053 75976 288 4.126531 11.88440928 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 143 1.54e-29   NTclustered gi|695405543|ref|XM_009525549.1| 67593 g74159 i0 80 59 195 37 67 2 34 227 1387 1580 Phytophthora sojae glucose-6-phosphate isomerase partial mRNA blastn 16992 143 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
25251044 25251044 PRJNA1115053_S_NODE_79980_length_283_cov_1.312500_g78163_i0 PRJNA1115053 79980 283 1.3125 3.714375 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 248 3.1e-61   NTclustered gi|1780534027|gb|MK752999.1| 65070 g78163 i0 82.686 96.2544169611307 283 45 99 4 1 281 949 1229 Pythium aphanidermatum isolate NDSO_L_8-6 beta-tubulin mRNA, complete cds blastn 27240 250 0.992 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium aphanidermatum
26774366 26774366 PRJNA1115053_S_NODE_57341_length_320_cov_3.812274_g55524_i0 PRJNA1115053 57341 320 3.812274 12.1992768 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 120 8.929999999999999e-31   NR TMW64271.1 41045 g55524 i0 59 2.90625 105 34 93.8 2 320 21 174 274 TMW64271.1 hypothetical protein Poli38472_012893 [Pythium oligandrum] diamond 930 120 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
26783348 26783348 PRJNA1115053_S_NODE_245381_length_177_cov_1.432836_g243564_i0 PRJNA1115053 245381 177 1.432836 2.53611972 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 57.4 9.48e-8   NR KAG9404500.1 112091 g243564 i0 46.6 6.44067796610169 58 31 98.3 0 176 3 240 297 KAG9404500.1 Hydrogenosomal carrier protein [Aphanomyces cochlioides] diamond 1140 57.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
26878435 26878435 PRJNA1115053_S_NODE_182001_length_202_cov_1.503145_g180184_i0 PRJNA1115053 182001 202 1.503145 3.0363529 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00612   NR XP_067816527.1 4779 g180184 i0 37 0.683168316831683 46 26 63.9 1 66 194 724 769 XP_067816527.1 hypothetical protein CCR75_009617 [Bremia lactucae] diamond 138 44.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
29332760 29332760 PRJNA1115053_S_NODE_93569_length_266_cov_2.152466_g91752_i0 PRJNA1115053 93569 266 2.152466 5.72555956 Achlyaceae 3456998 SAR_Eukaryotes SAR_Eukaryotes 67 1.12e-10   NR OQR81994.1 74557 g91752 i0 38.9 3.04511278195489 90 33 99.2 3 266 3 260 329 OQR81994.1 diacylglycerol O-acyltransferase [Thraustotheca clavata] diamond 810 67.4 0.99406528189911 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;