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contig_metadata

17 rows where bioproject = "PRJNA1115053", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA1115053 · 17 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1504650 1504650 PRJNA1115053_S_NODE_96342_length_263_cov_1.559091_g94525_i0 PRJNA1115053 96342 263 1.559091 4.10040933 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g94525 i0 96.97 0.673003802281369 33 0 13 1 231 263 41 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 177 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
7402424 7402424 PRJNA1115053_S_NODE_32226_length_392_cov_2.616046_g30413_i0 PRJNA1115053 32226 392 2.616046 10.25490032 Condylostoma 40632 SAR_Eukaryotes SAR_Eukaryotes 89.8 2.86e-13   NTclustered gi|1820251576|gb|MT175574.1| 2306908 g30413 i0 85.057 6.61989795918367 87 13 22 0 157 243 1244 1330 Condylostoma sp. isolate PXM10121007 large subunit ribosomal RNA gene, partial sequence blastn 2595 89.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Condylostomatidae Condylostoma Condylostoma sp.
7878652 7878652 PRJNA1115053_S_NODE_242447_length_178_cov_1.422222_g240630_i0 PRJNA1115053 242447 178 1.422222 2.53155516 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g240630 i0 100 0.792134831460674 29 0 16 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
8677971 8677971 PRJNA1115053_S_NODE_92387_length_267_cov_4.388393_g90570_i0 PRJNA1115053 92387 267 4.388393 11.71700931 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 488 1.5699999999999998e-133   NTclustered gi|1837628855|gb|MN158348.1| 5909 g90570 i0 99.625 98.8052434456929 267 1 100 0 1 267 2661 2927 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 26381 488 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
9157548 9157548 PRJNA1115053_S_NODE_90908_length_269_cov_2.146018_g89091_i0 PRJNA1115053 90908 269 2.146018 5.77278842 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g89091 i0 100 0.237918215613383 29 0 11 0 241 269 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 64 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
9952806 9952806 PRJNA1115053_S_NODE_322568_length_155_cov_25.785714_g320751_i0 PRJNA1115053 322568 155 25.785714 39.9678567 root 1 Root_unresolved Root_unresolved 287 3.21e-73   NTclustered gi|10832|emb|X54512.1| 5911 g320751 i0 100 100.051612903226 155 0 100 0 1 155 8114 8268 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 15508 287 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
10427083 10427083 PRJNA1115053_S_NODE_14929_length_508_cov_840.946237_g13160_i0 PRJNA1115053 14929 508 840.946237 4272.00688396 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 60.2 2.97e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g13160 i0 100 0.230314960629921 32 0 6 0 1 32 12 43 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 117 60.2 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
12978008 12978008 PRJNA1115053_S_NODE_174091_length_206_cov_1.251534_g172274_i0 PRJNA1115053 174091 206 1.251534 2.57816004 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g172274 i0 100 0.276699029126214 29 0 14 0 178 206 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
12983015 12983015 PRJNA1115053_S_NODE_68011_length_301_cov_0.930233_g66194_i0 PRJNA1115053 68011 301 0.930233 2.80000133 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 58.4 6.02e-4   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g66194 i0 100 0.475083056478405 31 0 10 0 1 31 10 40 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 143 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
13777998 13777998 PRJNA1115053_S_NODE_39691_length_364_cov_14.791277_g37874_i0 PRJNA1115053 39691 364 14.791277 53.84024828 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 673 0   NTclustered gi|2065561668|gb|MZ540265.1| 44029 g37874 i0 100 100.005494505495 364 0 100 0 1 364 546 909 Paramecium jenningsi isolate UR02 small subunit ribosomal RNA gene, partial sequence blastn 36402 673 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium jenningsi
14253962 14253962 PRJNA1115053_S_NODE_207912_length_190_cov_20.564626_g206095_i0 PRJNA1115053 207912 190 20.564626 39.0727894 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g206095 i0 100 0.305263157894737 30 0 16 0 161 190 38 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 58 56.5 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
15528379 15528379 PRJNA1115053_S_NODE_244993_length_177_cov_1.731343_g243176_i0 PRJNA1115053 244993 177 1.731343 3.06447711 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g243176 i0 100 0.796610169491525 29 0 16 0 149 177 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
16326908 16326908 PRJNA1115053_S_NODE_219973_length_186_cov_1.237762_g218156_i0 PRJNA1115053 219973 186 1.237762 2.30223732 root 1 Root_unresolved Root_unresolved 344 2.34e-90   NTclustered gi|1837628855|gb|MN158348.1| 5909 g218156 i0 100 100.634408602151 186 0 100 0 1 186 5390 5205 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 18718 344 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
20151037 20151037 PRJNA1115053_S_NODE_322836_length_155_cov_3.919643_g321019_i0 PRJNA1115053 322836 155 3.919643 6.07544665 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 287 3.21e-73   NTclustered gi|2065561668|gb|MZ540265.1| 44029 g321019 i0 100 99.9548387096774 155 0 100 0 1 155 1410 1564 Paramecium jenningsi isolate UR02 small subunit ribosomal RNA gene, partial sequence blastn 15493 287 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium jenningsi
20626191 20626191 PRJNA1115053_S_NODE_212517_length_189_cov_0.986301_g210700_i0 PRJNA1115053 212517 189 0.986301 1.86410889 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g210700 i0 100 0.301587301587302 29 0 15 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
21426450 21426450 PRJNA1115053_S_NODE_257637_length_173_cov_1.623077_g255820_i0 PRJNA1115053 257637 173 1.623077 2.80792321 root 1 Root_unresolved Root_unresolved 315 1.68e-81   NTclustered gi|10782|emb|X54004.1| 5908 g255820 i0 99.422 92.1445086705202 173 1 100 0 1 173 1943 1771 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 15941 315 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
23181804 23181804 PRJNA1115053_S_NODE_82139_length_280_cov_1.561181_g80322_i0 PRJNA1115053 82139 280 1.561181 4.3713068 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g80322 i0 100 0.203571428571429 29 0 10 0 252 280 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;