RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1115053", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1115053 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29593903 29593903 PRJNA1115053_S_NODE_84310_length_277_cov_2.299145_g82493_i0 PRJNA1115053 84310 277 2.299145 6.36863165 Lentisphaerae bacterium ADurb.Bin242 1852900 Bacteria Bacteria 60.5 2.98e-8   NR OQA87337.1 1852900 g82493 i0 67.4 1.50541516245487 46 15 49.8 0 3 140 347 392 OQA87337.1 MAG: Aspartate aminotransferase [Lentisphaerae bacterium ADurb.Bin242] diamond 417 60.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium ADurb.Bin242
32566046 32566046 PRJNA1115053_S_NODE_200879_length_193_cov_3.520000_g199062_i0 PRJNA1115053 200879 193 3.52 6.7936 Lentisphaeria bacterium 2053569 Bacteria Bacteria 42 0.0359   NR MBQ9502096.1 2053569 g199062 i0 39.6 0.823834196891192 53 30 82.4 1 33 191 476 526 MBQ9502096.1 hypothetical protein [Lentisphaeria bacterium] diamond 159 42 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;