RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1115053", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1115053 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31047759 31047759 PRJNA1115053_S_NODE_261215_length_172_cov_1.488372_g259398_i0 PRJNA1115053 261215 172 1.488372 2.55999984 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.7 0.00303   NR MDD5436521.1 2035772 g259398 i0 41.7 0.837209302325581 48 24 83.7 1 22 165 274 317 MDD5436521.1 acetyl-CoA decarbonylase/synthase complex subunit gamma [Candidatus Omnitrophota bacterium] diamond 144 44.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32566051 32566051 PRJNA1115053_S_NODE_286259_length_165_cov_1.180328_g284442_i0 PRJNA1115053 286259 165 1.180328 1.9475412 Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_ 2035772 Bacteria Bacteria 41.2 0.0455   NR PIQ86877.1 1974748 g284442 i0 37.8 0.818181818181818 45 28 81.8 0 149 15 259 303 PIQ86877.1 MAG: hypothetical protein COV74_03330 [Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26] diamond 135 41.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Abzuiibacterium Candidatus Abzuiibacterium crystallinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;