RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1115053", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 4 ✖

tax_clade 1

  • Amoebozoa · 4 ✖

bioproject 1

  • PRJNA1115053 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14255422 14255422 PRJNA1115053_S_NODE_271292_length_169_cov_1.523810_g269475_i0 PRJNA1115053 271292 169 1.52381 2.5752389 Tychosporium micropunctatum 2966351 Evosea other_Eukaryota 108 2.97e-19   NTclustered gi|2467140638|dbj|LC720132.1| 2966351 g269475 i0 100 33.7396449704142 58 0 34 0 112 169 602 545 Tychosporium micropunctatum YIP-40 gene for 18S rRNA, partial sequence blastn 5702 108 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Tychosporium Tychosporium micropunctatum
14258402 14258402 PRJNA1115053_S_NODE_77532_length_286_cov_2.362140_g75715_i0 PRJNA1115053 77532 286 2.36214 6.7557204 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.026   NTclustered gi|1685363|gb|U78320.1|EIU78320 33085 g75715 i0 100 0.0979020979020979 28 0 10 0 93 120 323 350 Entamoeba invadens chitinase gene, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
19350354 19350354 PRJNA1115053_S_NODE_184576_length_201_cov_1.189873_g182759_i0 PRJNA1115053 184576 201 1.189873 2.39164473 Tychosporium acutostipes 668358 Evosea other_Eukaryota 165 2.15e-36   NTclustered gi|2467140639|dbj|LC720133.1| 668358 g182759 i0 88.028 68.7014925373134 142 13 70 4 62 201 796 935 Tychosporium acutostipes YIP-60 gene for 18S rRNA, partial sequence blastn 13809 165 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Tychosporium Tychosporium acutostipes
29152586 29152586 PRJNA1115053_S_NODE_303509_length_160_cov_2.051282_g301692_i0 PRJNA1115053 303509 160 2.051282 3.2820512 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 50.8 1.7e-5   NR XP_012755010.1 1410327 g301692 i0 50 1.78125 48 24 90 0 148 5 189 236 XP_012755010.1 hypothetical protein SAMD00019534_050850 [Acytostelium subglobosum LB1] diamond 285 50.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;