contig_metadata
10 rows where bioproject = "PRJNA1113956", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19347913 | 19347913 | PRJNA1113956_P_NODE_21836_length_244_cov_0.900585_g21496_i0 | PRJNA1113956 | 21836 | 244 | 0.900585 | 2.1974274 | Kallotenue papyrolyticum | 1325125 | Bacteria | Bacteria | 161 | 1.52e-45 | NR | WP_026369315.1 | 1325125 | g21496 | i0 | 96.3 | 0.995901639344262 | 81 | 3 | 99.6 | 0 | 2 | 244 | 4 | 84 | WP_026369315.1 ribosome biogenesis GTPase Der [Kallotenue papyrolyticum] | diamond | 243 | 161 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Kallotenuales | Kallotenuaceae | Kallotenue | Kallotenue papyrolyticum | ||
| 23174303 | 23174303 | PRJNA1113956_P_NODE_22399_length_242_cov_0.911243_g22059_i0 | PRJNA1113956 | 22399 | 242 | 0.911243 | 2.20520806 | Bacteria | 2 | Bacteria | Bacteria | 82.4 | 2.32e-16 | NR | MBI1278322.1 | 2024896 | g22059 | i0 | 56 | 2.92561983471074 | 75 | 33 | 93 | 0 | 16 | 240 | 14 | 88 | MBI1278322.1 ATP-binding cassette domain-containing protein [Anaerolineaceae bacterium] | diamond | 708 | 83.2 | 0.990384615384615 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineales | Anaerolineaceae | Anaerolineaceae bacterium | |||
| 26972997 | 26972997 | PRJNA1113956_P_NODE_21082_length_246_cov_0.890173_g20742_i0 | PRJNA1113956 | 21082 | 246 | 0.890173 | 2.18982558 | Kallotenue papyrolyticum | 1325125 | Bacteria | Bacteria | 150 | 7.79e-41 | NR | WP_276522252.1 | 1325125 | g20742 | i0 | 91.3 | 0.975609756097561 | 80 | 7 | 97.6 | 0 | 241 | 2 | 72 | 151 | WP_276522252.1 acyl-CoA synthetase [Kallotenue papyrolyticum] | diamond | 240 | 150 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Kallotenuales | Kallotenuaceae | Kallotenue | Kallotenue papyrolyticum | ||
| 27636797 | 27636797 | PRJNA1113956_P_NODE_15524_length_309_cov_1.305085_g15184_i0 | PRJNA1113956 | 15524 | 309 | 1.305085 | 4.03271265 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 128 | 8.21e-35 | NR | MCL6509830.1 | 2052143 | g15184 | i0 | 65.9 | 1.70873786407767 | 88 | 27 | 85.4 | 2 | 304 | 41 | 114 | 198 | MCL6509830.1 hypothetical protein [Anaerolineae bacterium] | diamond | 528 | 128 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 27794677 | 27794677 | PRJNA1113956_P_NODE_20924_length_247_cov_0.885057_g20584_i0 | PRJNA1113956 | 20924 | 247 | 0.885057 | 2.18609079 | Kallotenue papyrolyticum | 1325125 | Bacteria | Bacteria | 110 | 7.21e-27 | NR | WP_026369524.1 | 1325125 | g20584 | i0 | 94.9 | 0.716599190283401 | 59 | 3 | 71.7 | 0 | 3 | 179 | 319 | 377 | WP_026369524.1 DNA polymerase III subunit beta [Kallotenue papyrolyticum] | diamond | 177 | 110 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Kallotenuales | Kallotenuaceae | Kallotenue | Kallotenue papyrolyticum | ||
| 27952433 | 27952433 | PRJNA1113956_P_NODE_16885_length_288_cov_1.074419_g16545_i0 | PRJNA1113956 | 16885 | 288 | 1.074419 | 3.09432672 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 148 | 2.88e-42 | NR | MCL6509824.1 | 2052143 | g16545 | i0 | 74.5 | 3.91666666666667 | 94 | 24 | 97.9 | 0 | 3 | 284 | 95 | 188 | MCL6509824.1 conjugal transfer protein TraL [Anaerolineae bacterium] | diamond | 1128 | 148 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 29531157 | 29531157 | PRJNA1113956_P_NODE_22150_length_243_cov_0.905882_g21810_i0 | PRJNA1113956 | 22150 | 243 | 0.905882 | 2.20129326 | Kallotenue papyrolyticum | 1325125 | Bacteria | Bacteria | 136 | 3.819999999999999e-35 | NR | WP_029215213.1 | 1325125 | g21810 | i0 | 75 | 0.987654320987654 | 80 | 20 | 98.8 | 0 | 242 | 3 | 553 | 632 | WP_029215213.1 N-acetylmuramoyl-L-alanine amidase [Kallotenue papyrolyticum] | diamond | 240 | 136 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Kallotenuales | Kallotenuaceae | Kallotenue | Kallotenue papyrolyticum | ||
| 31363708 | 31363708 | PRJNA1113956_P_NODE_22096_length_243_cov_0.905882_g21756_i0 | PRJNA1113956 | 22096 | 243 | 0.905882 | 2.20129326 | Kallotenue papyrolyticum | 1325125 | Bacteria | Bacteria | 151 | 3.2899999999999992e-43 | NR | WP_025745925.1 | 1325125 | g21756 | i0 | 97.5 | 1 | 81 | 2 | 100 | 0 | 243 | 1 | 85 | 165 | WP_025745925.1 carbohydrate ABC transporter permease [Kallotenue papyrolyticum] | diamond | 243 | 151 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Kallotenuales | Kallotenuaceae | Kallotenue | Kallotenue papyrolyticum | ||
| 31964450 | 31964450 | PRJNA1113956_P_NODE_20318_length_249_cov_0.875000_g19978_i0 | PRJNA1113956 | 20318 | 249 | 0.875 | 2.17875 | Kallotenue papyrolyticum | 1325125 | Bacteria | Bacteria | 115 | 6.05e-30 | NR | WP_029215643.1 | 1325125 | g19978 | i0 | 93.4 | 0.734939759036145 | 61 | 4 | 73.5 | 0 | 184 | 2 | 1 | 61 | WP_029215643.1 septum site-determining protein MinC [Kallotenue papyrolyticum] | diamond | 183 | 115 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Kallotenuales | Kallotenuaceae | Kallotenue | Kallotenue papyrolyticum | ||
| 32723227 | 32723227 | PRJNA1113956_P_NODE_7840_length_537_cov_1.879310_g7506_i0 | PRJNA1113956 | 7840 | 537 | 1.87931 | 10.0918947 | Dehalococcoidales bacterium | 2026733 | Bacteria | Bacteria | 64.7 | 1.56e-8 | NR | UCC17555.1 | 2026733 | g7506 | i0 | 27.9 | 0.860335195530726 | 154 | 103 | 81.6 | 2 | 446 | 9 | 6 | 159 | UCC17555.1 MAG: amidase [Dehalococcoidales bacterium] | diamond | 462 | 64.7 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidales | Dehalococcoidales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;