RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1112809", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1112809 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27415826 27415826 PRJNA1112809_P_NODE_33463_length_753_cov_2.820588_g30356_i0 PRJNA1112809 33463 753 2.820588 21.23902764 Nitrososphaerota archaeon 2026795 Archaea Archaea 66.6 1.82e-9   NR MDA4120370.1 2026795 g30356 i0 29.1 0.657370517928287 165 104 63.7 4 516 37 10 166 MDA4120370.1 serine protease [Nitrososphaerota archaeon] diamond 495 66.6 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31607648 31607648 PRJNA1112809_P_NODE_138936_length_275_cov_1.143564_g135661_i0 PRJNA1112809 138936 275 1.143564 3.144801 root 1 Root_unresolved Root_unresolved 74.3 4.21e-14   NR MDG6937951.1 2026795 g135661 i0 70.2 1.56 47 14 51.3 0 3 143 87 133 MDG6937951.1 hypothetical protein [Nitrososphaerota archaeon] diamond 429 74.7 0.994645247657296 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;